Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HCFC1P51610 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 RNF152P1-201ENST00000397754 604 ntBASIC17.03■□□□□ 0.32
HCFC1P51610 Z85996.1-201ENST00000494644 937 ntBASIC17.03■□□□□ 0.32
HCFC1P51610 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.03■□□□□ 0.32
HCFC1P51610 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.03■□□□□ 0.32
HCFC1P51610 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.03■□□□□ 0.32
HCFC1P51610 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HCFC1P51610 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 KRT16P6-202ENST00000425692 1426 ntBASIC17.03■□□□□ 0.32
HCFC1P51610 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.03■□□□□ 0.32
HCFC1P51610 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HCFC1P51610 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.03■□□□□ 0.32
HCFC1P51610 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HCFC1P51610 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.03■□□□□ 0.32
HCFC1P51610 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
HCFC1P51610 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HCFC1P51610 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.03■□□□□ 0.32
HCFC1P51610 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HCFC1P51610 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.02■□□□□ 0.32
HCFC1P51610 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.02■□□□□ 0.32
HCFC1P51610 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HCFC1P51610 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.02■□□□□ 0.32
HCFC1P51610 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.02■□□□□ 0.32
HCFC1P51610 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HCFC1P51610 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.02■□□□□ 0.32
HCFC1P51610 AC069148.1-201ENST00000608741 768 ntBASIC17.02■□□□□ 0.32
HCFC1P51610 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.02■□□□□ 0.32
HCFC1P51610 AC141257.4-201ENST00000634557 245 ntBASIC17.02■□□□□ 0.32
HCFC1P51610 AC136944.6-201ENST00000634818 245 ntBASIC17.02■□□□□ 0.32
HCFC1P51610 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HCFC1P51610 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
HCFC1P51610 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.02■□□□□ 0.31
HCFC1P51610 AC007225.1-201ENST00000566331 1836 ntBASIC17.01■□□□□ 0.31
HCFC1P51610 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 TMEM179-206ENST00000616017 1645 ntBASIC17.01■□□□□ 0.31
HCFC1P51610 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HCFC1P51610 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 COX11P1-201ENST00000489116 835 ntBASIC17.01■□□□□ 0.31
HCFC1P51610 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.01■□□□□ 0.31
HCFC1P51610 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.01■□□□□ 0.31
HCFC1P51610 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.01■□□□□ 0.31
HCFC1P51610 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HCFC1P51610 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 TSPY5P-201ENST00000426936 936 ntBASIC17.01■□□□□ 0.31
HCFC1P51610 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.01■□□□□ 0.31
HCFC1P51610 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.01■□□□□ 0.31
HCFC1P51610 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HCFC1P51610 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.01■□□□□ 0.31
HCFC1P51610 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.01■□□□□ 0.31
HCFC1P51610 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
HCFC1P51610 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.01■□□□□ 0.31
HCFC1P51610 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HCFC1P51610 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.01■□□□□ 0.31
HCFC1P51610 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
HCFC1P51610 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17■□□□□ 0.31
HCFC1P51610 AC073130.3-201ENST00000624389 2278 ntBASIC17■□□□□ 0.31
HCFC1P51610 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HCFC1P51610 KRT18P56-201ENST00000507275 550 ntBASIC17■□□□□ 0.31
HCFC1P51610 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17■□□□□ 0.31
HCFC1P51610 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms