Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
PSEN1P49768 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PSEN1P49768 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.66■□□□□ 0.9
PSEN1P49768 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 AC012618.2-201ENST00000428058 849 ntBASIC20.66■□□□□ 0.9
PSEN1P49768 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.66■□□□□ 0.9
PSEN1P49768 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PSEN1P49768 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.66■□□□□ 0.9
PSEN1P49768 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.66■□□□□ 0.9
PSEN1P49768 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.66■□□□□ 0.9
PSEN1P49768 AP001412.1-201ENST00000608405 714 ntBASIC20.66■□□□□ 0.9
PSEN1P49768 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PSEN1P49768 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PSEN1P49768 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.66■□□□□ 0.9
PSEN1P49768 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.66■□□□□ 0.9
PSEN1P49768 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
PSEN1P49768 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PSEN1P49768 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PSEN1P49768 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PSEN1P49768 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 AL356309.3-201ENST00000624132 1934 ntBASIC20.65■□□□□ 0.9
PSEN1P49768 AC020916.1-201ENST00000587762 1774 ntBASIC20.65■□□□□ 0.9
PSEN1P49768 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.65■□□□□ 0.9
PSEN1P49768 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PSEN1P49768 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.65■□□□□ 0.9
PSEN1P49768 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PSEN1P49768 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PSEN1P49768 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.65■□□□□ 0.9
PSEN1P49768 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.65■□□□□ 0.9
PSEN1P49768 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PSEN1P49768 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PSEN1P49768 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PSEN1P49768 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.64■□□□□ 0.9
PSEN1P49768 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.64■□□□□ 0.9
PSEN1P49768 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PSEN1P49768 AP001271.2-201ENST00000624018 1556 ntBASIC20.64■□□□□ 0.9
PSEN1P49768 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
PSEN1P49768 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PSEN1P49768 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.64■□□□□ 0.89
PSEN1P49768 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
PSEN1P49768 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PSEN1P49768 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.64■□□□□ 0.89
PSEN1P49768 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.63■□□□□ 0.89
PSEN1P49768 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PSEN1P49768 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PSEN1P49768 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PSEN1P49768 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.63■□□□□ 0.89
PSEN1P49768 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.63■□□□□ 0.89
PSEN1P49768 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms