Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXA6P31267 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HOXA6P31267 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA6P31267 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA6P31267 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA6P31267 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXA6P31267 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA6P31267 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXA6P31267 LINC01311-201ENST00000565162 1445 ntBASIC19.33■□□□□ 0.68
HOXA6P31267 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
HOXA6P31267 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA6P31267 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXA6P31267 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA6P31267 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.32■□□□□ 0.68
HOXA6P31267 NPAP1P7-201ENST00000613027 823 ntBASIC19.32■□□□□ 0.68
HOXA6P31267 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXA6P31267 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA6P31267 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA6P31267 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.32■□□□□ 0.68
HOXA6P31267 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA6P31267 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXA6P31267 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HOXA6P31267 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA6P31267 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA6P31267 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA6P31267 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA6P31267 GCSHP2-201ENST00000560971 527 ntBASIC19.31■□□□□ 0.68
HOXA6P31267 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXA6P31267 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA6P31267 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA6P31267 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXA6P31267 AP001271.2-201ENST00000624018 1556 ntBASIC19.31■□□□□ 0.68
HOXA6P31267 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXA6P31267 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA6P31267 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
HOXA6P31267 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA6P31267 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.3■□□□□ 0.68
HOXA6P31267 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA6P31267 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
HOXA6P31267 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA6P31267 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA6P31267 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HOXA6P31267 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.3■□□□□ 0.68
HOXA6P31267 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.3■□□□□ 0.68
HOXA6P31267 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA6P31267 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HOXA6P31267 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.29■□□□□ 0.68
HOXA6P31267 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXA6P31267 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
HOXA6P31267 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HOXA6P31267 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA6P31267 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HOXA6P31267 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HOXA6P31267 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.29■□□□□ 0.68
HOXA6P31267 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXA6P31267 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.29■□□□□ 0.68
HOXA6P31267 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXA6P31267 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXA6P31267 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXA6P31267 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXA6P31267 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXA6P31267 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA6P31267 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
HOXA6P31267 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA6P31267 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA6P31267 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXA6P31267 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXA6P31267 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms