Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 KRT18P29-201ENST00000397031 1267 ntBASIC18.21■□□□□ 0.51
CHMP24386 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.21■□□□□ 0.51
CHMP24386 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CHMP24386 UNC93B4-201ENST00000505679 747 ntBASIC18.21■□□□□ 0.51
CHMP24386 AC005829.2-201ENST00000571422 1056 ntBASIC18.21■□□□□ 0.51
CHMP24386 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CHMP24386 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP24386 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHMP24386 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHMP24386 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.21■□□□□ 0.51
CHMP24386 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP24386 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHMP24386 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHMP24386 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP24386 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP24386 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 AL390719.1-204ENST00000412397 1219 ntBASIC18.2■□□□□ 0.5
CHMP24386 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.2■□□□□ 0.5
CHMP24386 AC023632.3-201ENST00000521633 145 ntBASIC18.2■□□□□ 0.5
CHMP24386 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHMP24386 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP24386 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP24386 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHMP24386 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP24386 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CHMP24386 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP24386 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP24386 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP24386 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP24386 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP24386 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHMP24386 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CHMP24386 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.18■□□□□ 0.5
CHMP24386 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CHMP24386 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.18■□□□□ 0.5
CHMP24386 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP24386 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP24386 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.18■□□□□ 0.5
CHMP24386 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.18■□□□□ 0.5
CHMP24386 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms