Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.89■■□□□ 1.09
RARBP10826 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.89■■□□□ 1.09
RARBP10826 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.89■■□□□ 1.09
RARBP10826 AL023803.3-201ENST00000615559 522 ntBASIC21.89■■□□□ 1.09
RARBP10826 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
RARBP10826 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RARBP10826 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RARBP10826 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.88■■□□□ 1.09
RARBP10826 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.88■■□□□ 1.09
RARBP10826 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.88■■□□□ 1.09
RARBP10826 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
RARBP10826 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RARBP10826 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.88■■□□□ 1.09
RARBP10826 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.88■■□□□ 1.09
RARBP10826 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.88■■□□□ 1.09
RARBP10826 AL121956.5-201ENST00000625261 221 ntBASIC21.88■■□□□ 1.09
RARBP10826 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.88■■□□□ 1.09
RARBP10826 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.88■■□□□ 1.09
RARBP10826 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARBP10826 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RARBP10826 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.87■■□□□ 1.09
RARBP10826 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.87■■□□□ 1.09
RARBP10826 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.87■■□□□ 1.09
RARBP10826 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.87■■□□□ 1.09
RARBP10826 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.87■■□□□ 1.09
RARBP10826 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.87■■□□□ 1.09
RARBP10826 AL353719.1-201ENST00000566847 864 ntBASIC21.87■■□□□ 1.09
RARBP10826 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.87■■□□□ 1.09
RARBP10826 KRT8P8-201ENST00000434750 1448 ntBASIC21.87■■□□□ 1.09
RARBP10826 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARBP10826 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARBP10826 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARBP10826 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.86■■□□□ 1.09
RARBP10826 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.86■■□□□ 1.09
RARBP10826 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARBP10826 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARBP10826 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 PCED1CP-201ENST00000419887 785 ntBASIC21.86■■□□□ 1.09
RARBP10826 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RARBP10826 HOMER2P1-201ENST00000455653 964 ntBASIC21.86■■□□□ 1.09
RARBP10826 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.86■■□□□ 1.09
RARBP10826 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.86■■□□□ 1.09
RARBP10826 KRT126P-201ENST00000549467 1181 ntBASIC21.86■■□□□ 1.09
RARBP10826 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.86■■□□□ 1.09
RARBP10826 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RARBP10826 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.86■■□□□ 1.09
RARBP10826 AC026310.3-201ENST00000625186 2373 ntBASIC21.85■■□□□ 1.09
RARBP10826 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RARBP10826 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RARBP10826 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
RARBP10826 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.85■■□□□ 1.09
RARBP10826 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.85■■□□□ 1.09
RARBP10826 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.85■■□□□ 1.09
RARBP10826 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RARBP10826 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.85■■□□□ 1.09
RARBP10826 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RARBP10826 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RARBP10826 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.84■■□□□ 1.09
RARBP10826 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.84■■□□□ 1.09
RARBP10826 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARBP10826 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARBP10826 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARBP10826 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.84■■□□□ 1.09
RARBP10826 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.84■■□□□ 1.09
RARBP10826 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.84■■□□□ 1.09
RARBP10826 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.84■■□□□ 1.09
RARBP10826 FAM86EP-206ENST00000510506 987 ntBASIC21.84■■□□□ 1.09
RARBP10826 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.84■■□□□ 1.09
RARBP10826 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.84■■□□□ 1.09
RARBP10826 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.84■■□□□ 1.09
RARBP10826 AC140113.3-201ENST00000605663 199 ntBASIC21.84■■□□□ 1.09
RARBP10826 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RARBP10826 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARBP10826 IER3-202ENST00000376377 1350 ntBASIC21.84■■□□□ 1.09
RARBP10826 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RARBP10826 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms