Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DQB2P05538 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 PRORSD1P-201ENST00000295112 541 ntBASIC19.8■□□□□ 0.76
HLA-DQB2P05538 ABHD17AP1-201ENST00000358206 933 ntBASIC19.8■□□□□ 0.76
HLA-DQB2P05538 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 KRT18P29-201ENST00000397031 1267 ntBASIC19.8■□□□□ 0.76
HLA-DQB2P05538 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 AC133681.1-201ENST00000465482 601 ntBASIC19.8■□□□□ 0.76
HLA-DQB2P05538 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HLA-DQB2P05538 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DQB2P05538 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AC004264.1-201ENST00000608354 794 ntBASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DQB2P05538 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DQB2P05538 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms