Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 MIR663A-201ENST00000385250 93 ntBASIC17.51■□□□□ 0.39
HLA-DQA2P01906 AC026185.1-201ENST00000445748 174 ntBASIC17.51■□□□□ 0.39
HLA-DQA2P01906 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 AC092437.1-201ENST00000624794 1048 ntBASIC17.51■□□□□ 0.39
HLA-DQA2P01906 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQA2P01906 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 MIR935-201ENST00000401179 91 ntBASIC17.5■□□□□ 0.39
HLA-DQA2P01906 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQA2P01906 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 AC018445.3-201ENST00000624177 1945 ntBASIC17.49■□□□□ 0.39
HLA-DQA2P01906 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 AL390719.1-204ENST00000412397 1219 ntBASIC17.49■□□□□ 0.39
HLA-DQA2P01906 CDCA4P2-201ENST00000441182 718 ntBASIC17.49■□□□□ 0.39
HLA-DQA2P01906 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQA2P01906 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 GPX1P1-201ENST00000388829 606 ntBASIC17.48■□□□□ 0.39
HLA-DQA2P01906 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQA2P01906 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms