Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KRT8P41-201ENST00000533985 1514 ntBASIC21.18■□□□□ 0.98
TIMP1P01033 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TIMP1P01033 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TIMP1P01033 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TIMP1P01033 FEM1AP4-201ENST00000443167 1987 ntBASIC21.17■□□□□ 0.98
TIMP1P01033 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TIMP1P01033 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TIMP1P01033 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.17■□□□□ 0.98
TIMP1P01033 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TIMP1P01033 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
TIMP1P01033 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.17■□□□□ 0.98
TIMP1P01033 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.17■□□□□ 0.98
TIMP1P01033 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.17■□□□□ 0.98
TIMP1P01033 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.17■□□□□ 0.98
TIMP1P01033 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TIMP1P01033 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TIMP1P01033 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TIMP1P01033 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TIMP1P01033 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TIMP1P01033 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TIMP1P01033 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TIMP1P01033 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.16■□□□□ 0.98
TIMP1P01033 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
TIMP1P01033 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.16■□□□□ 0.98
TIMP1P01033 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TIMP1P01033 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.16■□□□□ 0.98
TIMP1P01033 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.16■□□□□ 0.98
TIMP1P01033 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.16■□□□□ 0.98
TIMP1P01033 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.16■□□□□ 0.98
TIMP1P01033 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.16■□□□□ 0.98
TIMP1P01033 PRELID1P1-202ENST00000567272 903 ntBASIC21.16■□□□□ 0.98
TIMP1P01033 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.16■□□□□ 0.98
TIMP1P01033 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TIMP1P01033 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.15■□□□□ 0.98
TIMP1P01033 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.15■□□□□ 0.98
TIMP1P01033 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TIMP1P01033 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 SPDYE15P-201ENST00000424157 909 ntBASIC21.15■□□□□ 0.98
TIMP1P01033 SPDYE13P-201ENST00000445314 798 ntBASIC21.15■□□□□ 0.98
TIMP1P01033 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TIMP1P01033 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
TIMP1P01033 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.15■□□□□ 0.98
TIMP1P01033 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.15■□□□□ 0.98
TIMP1P01033 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.15■□□□□ 0.98
TIMP1P01033 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 LINC01465-201ENST00000408887 1940 ntBASIC21.15■□□□□ 0.98
TIMP1P01033 AC007225.1-201ENST00000566331 1836 ntBASIC21.15■□□□□ 0.98
TIMP1P01033 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TIMP1P01033 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.15■□□□□ 0.98
TIMP1P01033 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
TIMP1P01033 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TIMP1P01033 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TIMP1P01033 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.14■□□□□ 0.97
TIMP1P01033 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TIMP1P01033 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TIMP1P01033 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.14■□□□□ 0.97
TIMP1P01033 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.14■□□□□ 0.97
TIMP1P01033 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.14■□□□□ 0.97
TIMP1P01033 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
TIMP1P01033 AC092329.2-201ENST00000598402 547 ntBASIC21.14■□□□□ 0.97
TIMP1P01033 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TIMP1P01033 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.14■□□□□ 0.97
TIMP1P01033 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.14■□□□□ 0.97
TIMP1P01033 AC006128.1-201ENST00000624704 1661 ntBASIC21.14■□□□□ 0.97
TIMP1P01033 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TIMP1P01033 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TIMP1P01033 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.13■□□□□ 0.97
TIMP1P01033 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.13■□□□□ 0.97
TIMP1P01033 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms