Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.38■□□□□ 0.37
CDRT1O95170 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDRT1O95170 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.37■□□□□ 0.37
CDRT1O95170 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.37■□□□□ 0.37
CDRT1O95170 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.37■□□□□ 0.37
CDRT1O95170 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.37■□□□□ 0.37
CDRT1O95170 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.37■□□□□ 0.37
CDRT1O95170 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CDRT1O95170 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDRT1O95170 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.37■□□□□ 0.37
CDRT1O95170 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDRT1O95170 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.36■□□□□ 0.37
CDRT1O95170 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDRT1O95170 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.36■□□□□ 0.37
CDRT1O95170 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CDRT1O95170 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.36■□□□□ 0.37
CDRT1O95170 CCDC92B-201ENST00000575506 885 ntBASIC17.36■□□□□ 0.37
CDRT1O95170 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.36■□□□□ 0.37
CDRT1O95170 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 AC006333.2-201ENST00000607957 2099 ntBASIC17.36■□□□□ 0.37
CDRT1O95170 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.36■□□□□ 0.37
CDRT1O95170 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDRT1O95170 AL161938.1-201ENST00000569833 2180 ntBASIC17.36■□□□□ 0.37
CDRT1O95170 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.36■□□□□ 0.37
CDRT1O95170 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDRT1O95170 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDRT1O95170 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDRT1O95170 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.35■□□□□ 0.37
CDRT1O95170 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDRT1O95170 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.35■□□□□ 0.37
CDRT1O95170 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.35■□□□□ 0.37
CDRT1O95170 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.35■□□□□ 0.37
CDRT1O95170 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.35■□□□□ 0.37
CDRT1O95170 TERF1P2-201ENST00000583350 1212 ntBASIC17.35■□□□□ 0.37
CDRT1O95170 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.35■□□□□ 0.37
CDRT1O95170 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.35■□□□□ 0.37
CDRT1O95170 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDRT1O95170 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.35■□□□□ 0.37
CDRT1O95170 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDRT1O95170 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms