Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.7■□□□□ 0.58
SNRNP200O75643 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP200O75643 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SNRNP200O75643 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SNRNP200O75643 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNRNP200O75643 FAM197Y1-201ENST00000421178 764 ntBASIC18.7■□□□□ 0.58
SNRNP200O75643 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.7■□□□□ 0.58
SNRNP200O75643 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.7■□□□□ 0.58
SNRNP200O75643 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.7■□□□□ 0.58
SNRNP200O75643 AC073195.1-201ENST00000607241 877 ntBASIC18.7■□□□□ 0.58
SNRNP200O75643 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SNRNP200O75643 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 AC011506.1-201ENST00000474329 610 ntBASIC18.69■□□□□ 0.58
SNRNP200O75643 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 AL445675.2-201ENST00000620291 557 ntBASIC18.69■□□□□ 0.58
SNRNP200O75643 AL031985.4-201ENST00000642138 673 ntBASIC18.69■□□□□ 0.58
SNRNP200O75643 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNRNP200O75643 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SNRNP200O75643 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNRNP200O75643 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 AP002982.1-201ENST00000492365 877 ntBASIC18.68■□□□□ 0.58
SNRNP200O75643 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 AP003071.4-201ENST00000562276 1284 ntBASIC18.68■□□□□ 0.58
SNRNP200O75643 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.68■□□□□ 0.58
SNRNP200O75643 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.68■□□□□ 0.58
SNRNP200O75643 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SNRNP200O75643 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SNRNP200O75643 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNRNP200O75643 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.67■□□□□ 0.58
SNRNP200O75643 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SNRNP200O75643 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP200O75643 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.67■□□□□ 0.58
SNRNP200O75643 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP200O75643 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP200O75643 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP200O75643 MIR4785-201ENST00000585005 73 ntBASIC18.67■□□□□ 0.58
SNRNP200O75643 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP200O75643 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP200O75643 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNRNP200O75643 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNRNP200O75643 Z85996.1-201ENST00000494644 937 ntBASIC18.67■□□□□ 0.58
SNRNP200O75643 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 AC104417.2-201ENST00000562989 1793 ntBASIC18.67■□□□□ 0.58
SNRNP200O75643 C2orf69P3-201ENST00000565542 1120 ntBASIC18.67■□□□□ 0.58
SNRNP200O75643 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.67■□□□□ 0.58
SNRNP200O75643 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.67■□□□□ 0.58
SNRNP200O75643 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNRNP200O75643 HLA-A-209ENST00000638375 975 ntBASIC18.67■□□□□ 0.58
SNRNP200O75643 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SNRNP200O75643 ZNF815P-204ENST00000434898 1737 ntBASIC18.66■□□□□ 0.58
SNRNP200O75643 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.66■□□□□ 0.58
SNRNP200O75643 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNRNP200O75643 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.66■□□□□ 0.58
SNRNP200O75643 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms