Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COCHO43405 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COCHO43405 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.2■□□□□ 0.82
COCHO43405 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.2■□□□□ 0.82
COCHO43405 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 LINC01521-201ENST00000504184 1943 ntBASIC20.2■□□□□ 0.82
COCHO43405 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.2■□□□□ 0.82
COCHO43405 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.2■□□□□ 0.82
COCHO43405 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COCHO43405 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.2■□□□□ 0.82
COCHO43405 AC004951.3-201ENST00000418645 1148 ntBASIC20.2■□□□□ 0.82
COCHO43405 KRT18P21-201ENST00000515767 1272 ntBASIC20.2■□□□□ 0.82
COCHO43405 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.2■□□□□ 0.82
COCHO43405 NAPSB-206ENST00000562112 1266 ntBASIC20.2■□□□□ 0.82
COCHO43405 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
COCHO43405 AC145285.6-201ENST00000604632 637 ntBASIC20.2■□□□□ 0.82
COCHO43405 AC010947.1-201ENST00000623454 693 ntBASIC20.2■□□□□ 0.82
COCHO43405 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COCHO43405 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COCHO43405 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.2■□□□□ 0.82
COCHO43405 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COCHO43405 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COCHO43405 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COCHO43405 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.19■□□□□ 0.82
COCHO43405 AC097488.1-201ENST00000507834 756 ntBASIC20.19■□□□□ 0.82
COCHO43405 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.19■□□□□ 0.82
COCHO43405 AL160286.2-201ENST00000567150 934 ntBASIC20.19■□□□□ 0.82
COCHO43405 AP000692.2-201ENST00000608391 879 ntBASIC20.19■□□□□ 0.82
COCHO43405 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.19■□□□□ 0.82
COCHO43405 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COCHO43405 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
COCHO43405 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COCHO43405 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COCHO43405 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COCHO43405 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.18■□□□□ 0.82
COCHO43405 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.18■□□□□ 0.82
COCHO43405 AC091390.4-202ENST00000476426 537 ntBASIC20.18■□□□□ 0.82
COCHO43405 AP005242.2-201ENST00000580065 1175 ntBASIC20.18■□□□□ 0.82
COCHO43405 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.18■□□□□ 0.82
COCHO43405 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COCHO43405 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.18■□□□□ 0.82
COCHO43405 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.18■□□□□ 0.82
COCHO43405 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.18■□□□□ 0.82
COCHO43405 LINC01568-207ENST00000641790 1380 ntBASIC20.18■□□□□ 0.82
COCHO43405 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COCHO43405 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.18■□□□□ 0.82
COCHO43405 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.18■□□□□ 0.82
COCHO43405 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.17■□□□□ 0.82
COCHO43405 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.17■□□□□ 0.82
COCHO43405 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COCHO43405 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.17■□□□□ 0.82
COCHO43405 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.17■□□□□ 0.82
COCHO43405 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 CRYGFP-201ENST00000418459 633 ntBASIC20.17■□□□□ 0.82
COCHO43405 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.17■□□□□ 0.82
COCHO43405 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.17■□□□□ 0.82
COCHO43405 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.17■□□□□ 0.82
COCHO43405 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.17■□□□□ 0.82
COCHO43405 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COCHO43405 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COCHO43405 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COCHO43405 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.16■□□□□ 0.82
COCHO43405 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COCHO43405 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COCHO43405 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COCHO43405 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COCHO43405 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.16■□□□□ 0.82
COCHO43405 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COCHO43405 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COCHO43405 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COCHO43405 RCN1P1-201ENST00000400413 996 ntBASIC20.16■□□□□ 0.82
COCHO43405 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms