Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC31.77■■■□□ 2.68
CHD1O14646 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC31.77■■■□□ 2.68
CHD1O14646 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC31.77■■■□□ 2.68
CHD1O14646 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD1O14646 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC31.76■■■□□ 2.68
CHD1O14646 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHD1O14646 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHD1O14646 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CHD1O14646 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
CHD1O14646 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC31.76■■■□□ 2.67
CHD1O14646 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CHD1O14646 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC31.76■■■□□ 2.67
CHD1O14646 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC31.76■■■□□ 2.67
CHD1O14646 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CHD1O14646 KRT8P26-201ENST00000534154 1276 ntBASIC31.76■■■□□ 2.67
CHD1O14646 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC31.76■■■□□ 2.67
CHD1O14646 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CHD1O14646 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC31.76■■■□□ 2.67
CHD1O14646 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CHD1O14646 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1O14646 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC31.75■■■□□ 2.67
CHD1O14646 DRAXINP1-201ENST00000437611 948 ntBASIC31.75■■■□□ 2.67
CHD1O14646 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1O14646 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC31.75■■■□□ 2.67
CHD1O14646 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1O14646 AC092183.1-201ENST00000469884 875 ntBASIC31.75■■■□□ 2.67
CHD1O14646 KRT18P31-201ENST00000506277 1292 ntBASIC31.75■■■□□ 2.67
CHD1O14646 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC31.75■■■□□ 2.67
CHD1O14646 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC31.75■■■□□ 2.67
CHD1O14646 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC31.75■■■□□ 2.67
CHD1O14646 AC005229.4-201ENST00000610085 2198 ntBASIC31.75■■■□□ 2.67
CHD1O14646 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
CHD1O14646 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD1O14646 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC31.75■■■□□ 2.67
CHD1O14646 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
CHD1O14646 AL121912.1-201ENST00000603683 238 ntBASIC31.75■■■□□ 2.67
CHD1O14646 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
CHD1O14646 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
CHD1O14646 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 KRT16P4-201ENST00000453883 522 ntBASIC31.74■■■□□ 2.67
CHD1O14646 SLC25A1P1-201ENST00000528351 927 ntBASIC31.74■■■□□ 2.67
CHD1O14646 AC011498.5-201ENST00000592027 486 ntBASIC31.74■■■□□ 2.67
CHD1O14646 TP73-AS1-207ENST00000624167 988 ntBASIC31.74■■■□□ 2.67
CHD1O14646 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD1O14646 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC31.73■■■□□ 2.67
CHD1O14646 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC31.73■■■□□ 2.67
CHD1O14646 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC31.73■■■□□ 2.67
CHD1O14646 AKR1C7P-201ENST00000305623 895 ntBASIC31.73■■■□□ 2.67
CHD1O14646 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHD1O14646 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHD1O14646 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC31.73■■■□□ 2.67
CHD1O14646 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
CHD1O14646 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHD1O14646 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC31.73■■■□□ 2.67
CHD1O14646 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHD1O14646 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CHD1O14646 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1O14646 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC31.72■■■□□ 2.67
CHD1O14646 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CHD1O14646 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1O14646 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC31.72■■■□□ 2.67
CHD1O14646 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC31.72■■■□□ 2.67
CHD1O14646 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1O14646 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CHD1O14646 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC31.72■■■□□ 2.67
CHD1O14646 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1O14646 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC31.72■■■□□ 2.67
CHD1O14646 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1O14646 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CHD1O14646 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC31.72■■■□□ 2.67
CHD1O14646 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC31.72■■■□□ 2.67
CHD1O14646 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD1O14646 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHD1O14646 DPP3P2-201ENST00000416030 1696 ntBASIC31.71■■■□□ 2.67
CHD1O14646 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD1O14646 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC31.71■■■□□ 2.67
CHD1O14646 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHD1O14646 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.7■■■□□ 2.67
CHD1O14646 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CHD1O14646 TUB-203ENST00000534099 1759 ntTSL 2 BASIC31.7■■■□□ 2.67
CHD1O14646 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CHD1O14646 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CHD1O14646 MIR1233-2-201ENST00000408138 82 ntBASIC31.7■■■□□ 2.67
CHD1O14646 MIR1233-1-201ENST00000408722 82 ntBASIC31.7■■■□□ 2.67
CHD1O14646 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC31.7■■■□□ 2.67
CHD1O14646 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CHD1O14646 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.66
CHD1O14646 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CHD1O14646 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHD1O14646 AL162741.1-201ENST00000565563 1558 ntBASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms