Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 AC141586.3-201ENST00000562166 1838 ntBASIC18.93■□□□□ 0.62
UBFD1O14562 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.93■□□□□ 0.62
UBFD1O14562 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.93■□□□□ 0.62
UBFD1O14562 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.93■□□□□ 0.62
UBFD1O14562 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBFD1O14562 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.92■□□□□ 0.62
UBFD1O14562 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBFD1O14562 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBFD1O14562 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 ZNF815P-204ENST00000434898 1737 ntBASIC18.92■□□□□ 0.62
UBFD1O14562 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
UBFD1O14562 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.92■□□□□ 0.62
UBFD1O14562 DUSP5P2-201ENST00000426873 1033 ntBASIC18.92■□□□□ 0.62
UBFD1O14562 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.92■□□□□ 0.62
UBFD1O14562 AL137784.2-201ENST00000607332 1000 ntBASIC18.92■□□□□ 0.62
UBFD1O14562 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.92■□□□□ 0.62
UBFD1O14562 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBFD1O14562 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBFD1O14562 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.91■□□□□ 0.62
UBFD1O14562 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBFD1O14562 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBFD1O14562 NEFHP1-201ENST00000412845 2629 ntBASIC18.91■□□□□ 0.62
UBFD1O14562 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UBFD1O14562 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBFD1O14562 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBFD1O14562 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UBFD1O14562 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UBFD1O14562 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.91■□□□□ 0.62
UBFD1O14562 AL390719.1-204ENST00000412397 1219 ntBASIC18.91■□□□□ 0.62
UBFD1O14562 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.91■□□□□ 0.62
UBFD1O14562 AC006557.6-201ENST00000623071 864 ntBASIC18.91■□□□□ 0.62
UBFD1O14562 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
UBFD1O14562 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
UBFD1O14562 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.91■□□□□ 0.62
UBFD1O14562 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
UBFD1O14562 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBFD1O14562 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UBFD1O14562 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
UBFD1O14562 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 AL138781.2-201ENST00000617896 1843 ntBASIC18.9■□□□□ 0.62
UBFD1O14562 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.9■□□□□ 0.62
UBFD1O14562 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UBFD1O14562 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
UBFD1O14562 AC006333.2-201ENST00000607957 2099 ntBASIC18.89■□□□□ 0.62
UBFD1O14562 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
UBFD1O14562 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UBFD1O14562 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UBFD1O14562 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UBFD1O14562 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.89■□□□□ 0.61
UBFD1O14562 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms