Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN3O00409 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN3O00409 YBX1P10-201ENST00000444752 975 ntBASIC20.89■□□□□ 0.93
FOXN3O00409 RNA5SP413-201ENST00000516373 109 ntBASIC20.89■□□□□ 0.93
FOXN3O00409 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.89■□□□□ 0.93
FOXN3O00409 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN3O00409 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN3O00409 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN3O00409 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN3O00409 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN3O00409 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXN3O00409 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
FOXN3O00409 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN3O00409 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN3O00409 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN3O00409 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FOXN3O00409 AP000974.1-201ENST00000623909 2387 ntBASIC20.88■□□□□ 0.93
FOXN3O00409 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN3O00409 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN3O00409 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN3O00409 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
FOXN3O00409 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXN3O00409 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.88■□□□□ 0.93
FOXN3O00409 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN3O00409 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN3O00409 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
FOXN3O00409 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN3O00409 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN3O00409 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN3O00409 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXN3O00409 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN3O00409 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN3O00409 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FOXN3O00409 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.87■□□□□ 0.93
FOXN3O00409 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXN3O00409 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN3O00409 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN3O00409 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN3O00409 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN3O00409 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXN3O00409 ZNF815P-204ENST00000434898 1737 ntBASIC20.87■□□□□ 0.93
FOXN3O00409 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN3O00409 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXN3O00409 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXN3O00409 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXN3O00409 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXN3O00409 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.86■□□□□ 0.93
FOXN3O00409 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
FOXN3O00409 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXN3O00409 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 KRT8P8-201ENST00000434750 1448 ntBASIC20.86■□□□□ 0.93
FOXN3O00409 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXN3O00409 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXN3O00409 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN3O00409 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
FOXN3O00409 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXN3O00409 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 BX323043.1-201ENST00000641006 1765 ntBASIC20.85■□□□□ 0.93
FOXN3O00409 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXN3O00409 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
FOXN3O00409 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXN3O00409 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
FOXN3O00409 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.85■□□□□ 0.93
FOXN3O00409 KRT18P16-201ENST00000510337 1294 ntBASIC20.85■□□□□ 0.93
FOXN3O00409 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.85■□□□□ 0.93
FOXN3O00409 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN3O00409 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms