Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cr1Q9Z0D9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cr1Q9Z0D9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cr1Q9Z0D9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.86■□□□□ 0.77
Cx3cr1Q9Z0D9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cr1Q9Z0D9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cr1Q9Z0D9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cr1Q9Z0D9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cr1Q9Z0D9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cr1Q9Z0D9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Gm24804-201ENSMUST00000174982 85 ntBASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cr1Q9Z0D9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cr1Q9Z0D9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cr1Q9Z0D9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cr1Q9Z0D9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.77■□□□□ 0.75
Cx3cr1Q9Z0D9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cx3cr1Q9Z0D9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cx3cr1Q9Z0D9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cr1Q9Z0D9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cr1Q9Z0D9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cr1Q9Z0D9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cx3cr1Q9Z0D9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cr1Q9Z0D9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cr1Q9Z0D9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cr1Q9Z0D9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.68■□□□□ 0.74
Cx3cr1Q9Z0D9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cr1Q9Z0D9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cr1Q9Z0D9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cx3cr1Q9Z0D9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cr1Q9Z0D9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cr1Q9Z0D9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cr1Q9Z0D9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cr1Q9Z0D9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.65■□□□□ 0.74
Cx3cr1Q9Z0D9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cr1Q9Z0D9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms