Protein–RNA interactions for Protein: Q9QXK9

Sh2d2a, SH2 domain-containing protein 2A, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d2aQ9QXK9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d2aQ9QXK9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sh2d2aQ9QXK9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d2aQ9QXK9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Sh2d2aQ9QXK9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sh2d2aQ9QXK9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Sh2d2aQ9QXK9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d2aQ9QXK9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sh2d2aQ9QXK9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d2aQ9QXK9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d2aQ9QXK9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sh2d2aQ9QXK9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d2aQ9QXK9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sh2d2aQ9QXK9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d2aQ9QXK9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d2aQ9QXK9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sh2d2aQ9QXK9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sh2d2aQ9QXK9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d2aQ9QXK9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d2aQ9QXK9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sh2d2aQ9QXK9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sh2d2aQ9QXK9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh2d2aQ9QXK9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.51■□□□□ 0.71
Sh2d2aQ9QXK9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh2d2aQ9QXK9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Sh2d2aQ9QXK9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d2aQ9QXK9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d2aQ9QXK9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d2aQ9QXK9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d2aQ9QXK9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d2aQ9QXK9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d2aQ9QXK9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d2aQ9QXK9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d2aQ9QXK9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Sh2d2aQ9QXK9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d2aQ9QXK9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d2aQ9QXK9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sh2d2aQ9QXK9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.46■□□□□ 0.71
Sh2d2aQ9QXK9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d2aQ9QXK9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.45■□□□□ 0.7
Sh2d2aQ9QXK9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Sh2d2aQ9QXK9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d2aQ9QXK9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d2aQ9QXK9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d2aQ9QXK9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d2aQ9QXK9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sh2d2aQ9QXK9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d2aQ9QXK9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh2d2aQ9QXK9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh2d2aQ9QXK9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sh2d2aQ9QXK9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh2d2aQ9QXK9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sh2d2aQ9QXK9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d2aQ9QXK9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d2aQ9QXK9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d2aQ9QXK9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d2aQ9QXK9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sh2d2aQ9QXK9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh2d2aQ9QXK9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d2aQ9QXK9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d2aQ9QXK9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh2d2aQ9QXK9 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.38■□□□□ 0.69
Sh2d2aQ9QXK9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d2aQ9QXK9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d2aQ9QXK9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Sh2d2aQ9QXK9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh2d2aQ9QXK9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sh2d2aQ9QXK9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sh2d2aQ9QXK9 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.36■□□□□ 0.69
Sh2d2aQ9QXK9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh2d2aQ9QXK9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh2d2aQ9QXK9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh2d2aQ9QXK9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d2aQ9QXK9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d2aQ9QXK9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh2d2aQ9QXK9 Nkain2-201ENSMUST00000092602 558 ntBASIC19.33■□□□□ 0.68
Sh2d2aQ9QXK9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d2aQ9QXK9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d2aQ9QXK9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh2d2aQ9QXK9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh2d2aQ9QXK9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms