Protein–RNA interactions for Protein: Q9JIA1

Lgi1, Leucine-rich glioma-inactivated protein 1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi1Q9JIA1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lgi1Q9JIA1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lgi1Q9JIA1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Lgi1Q9JIA1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.94■■□□□ 1.1
Lgi1Q9JIA1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lgi1Q9JIA1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.93■■□□□ 1.1
Lgi1Q9JIA1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
Lgi1Q9JIA1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lgi1Q9JIA1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lgi1Q9JIA1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.92■■□□□ 1.1
Lgi1Q9JIA1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lgi1Q9JIA1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi1Q9JIA1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Lgi1Q9JIA1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lgi1Q9JIA1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.91■■□□□ 1.1
Lgi1Q9JIA1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Lgi1Q9JIA1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lgi1Q9JIA1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi1Q9JIA1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Lgi1Q9JIA1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Lgi1Q9JIA1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lgi1Q9JIA1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Lgi1Q9JIA1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.87■■□□□ 1.09
Lgi1Q9JIA1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi1Q9JIA1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lgi1Q9JIA1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi1Q9JIA1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.86■■□□□ 1.09
Lgi1Q9JIA1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.86■■□□□ 1.09
Lgi1Q9JIA1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lgi1Q9JIA1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.85■■□□□ 1.09
Lgi1Q9JIA1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lgi1Q9JIA1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lgi1Q9JIA1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lgi1Q9JIA1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lgi1Q9JIA1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Lgi1Q9JIA1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.82■■□□□ 1.08
Lgi1Q9JIA1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lgi1Q9JIA1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Lgi1Q9JIA1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lgi1Q9JIA1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lgi1Q9JIA1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lgi1Q9JIA1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Lgi1Q9JIA1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lgi1Q9JIA1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lgi1Q9JIA1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lgi1Q9JIA1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lgi1Q9JIA1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.8■■□□□ 1.08
Lgi1Q9JIA1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lgi1Q9JIA1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lgi1Q9JIA1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.79■■□□□ 1.08
Lgi1Q9JIA1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Lgi1Q9JIA1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lgi1Q9JIA1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lgi1Q9JIA1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.77■■□□□ 1.08
Lgi1Q9JIA1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Lgi1Q9JIA1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lgi1Q9JIA1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.76■■□□□ 1.07
Lgi1Q9JIA1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lgi1Q9JIA1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lgi1Q9JIA1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lgi1Q9JIA1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lgi1Q9JIA1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.74■■□□□ 1.07
Lgi1Q9JIA1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lgi1Q9JIA1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Lgi1Q9JIA1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lgi1Q9JIA1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lgi1Q9JIA1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lgi1Q9JIA1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lgi1Q9JIA1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.72■■□□□ 1.07
Lgi1Q9JIA1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lgi1Q9JIA1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.71■■□□□ 1.07
Lgi1Q9JIA1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lgi1Q9JIA1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lgi1Q9JIA1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Lgi1Q9JIA1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lgi1Q9JIA1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lgi1Q9JIA1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.69■■□□□ 1.06
Lgi1Q9JIA1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.69■■□□□ 1.06
Lgi1Q9JIA1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Lgi1Q9JIA1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lgi1Q9JIA1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Lgi1Q9JIA1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lgi1Q9JIA1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lgi1Q9JIA1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lgi1Q9JIA1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Lgi1Q9JIA1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lgi1Q9JIA1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.65■■□□□ 1.06
Lgi1Q9JIA1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Lgi1Q9JIA1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lgi1Q9JIA1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lgi1Q9JIA1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lgi1Q9JIA1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lgi1Q9JIA1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms