Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf135Q9CWS1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.54■■□□□ 1.52
Rnf135Q9CWS1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf135Q9CWS1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf135Q9CWS1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.51■■□□□ 1.51
Rnf135Q9CWS1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Rnf135Q9CWS1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
Rnf135Q9CWS1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf135Q9CWS1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Rnf135Q9CWS1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf135Q9CWS1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf135Q9CWS1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf135Q9CWS1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rnf135Q9CWS1 Gm8503-201ENSMUST00000118131 455 ntBASIC24.45■■□□□ 1.5
Rnf135Q9CWS1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Rnf135Q9CWS1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf135Q9CWS1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf135Q9CWS1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf135Q9CWS1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rnf135Q9CWS1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf135Q9CWS1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf135Q9CWS1 Gm6821-201ENSMUST00000107540 542 ntBASIC24.41■■□□□ 1.5
Rnf135Q9CWS1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.41■■□□□ 1.5
Rnf135Q9CWS1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf135Q9CWS1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf135Q9CWS1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Rnf135Q9CWS1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.4■■□□□ 1.5
Rnf135Q9CWS1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf135Q9CWS1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rnf135Q9CWS1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf135Q9CWS1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf135Q9CWS1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf135Q9CWS1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf135Q9CWS1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf135Q9CWS1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf135Q9CWS1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.36■■□□□ 1.49
Rnf135Q9CWS1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf135Q9CWS1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf135Q9CWS1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf135Q9CWS1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rnf135Q9CWS1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
Rnf135Q9CWS1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf135Q9CWS1 Gm30023-201ENSMUST00000197970 889 ntBASIC24.31■■□□□ 1.48
Rnf135Q9CWS1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf135Q9CWS1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf135Q9CWS1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf135Q9CWS1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Rnf135Q9CWS1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnf135Q9CWS1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rnf135Q9CWS1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.29■■□□□ 1.48
Rnf135Q9CWS1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf135Q9CWS1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf135Q9CWS1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf135Q9CWS1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rnf135Q9CWS1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rnf135Q9CWS1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rnf135Q9CWS1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf135Q9CWS1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf135Q9CWS1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf135Q9CWS1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf135Q9CWS1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Rnf135Q9CWS1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf135Q9CWS1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf135Q9CWS1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf135Q9CWS1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf135Q9CWS1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf135Q9CWS1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf135Q9CWS1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Rnf135Q9CWS1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf135Q9CWS1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf135Q9CWS1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf135Q9CWS1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf135Q9CWS1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf135Q9CWS1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf135Q9CWS1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Rnf135Q9CWS1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf135Q9CWS1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf135Q9CWS1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf135Q9CWS1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf135Q9CWS1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnf135Q9CWS1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.18■■□□□ 1.46
Rnf135Q9CWS1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.18■■□□□ 1.46
Rnf135Q9CWS1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnf135Q9CWS1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms