Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retreg3Q9CQV4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.86■■□□□ 1.41
Retreg3Q9CQV4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retreg3Q9CQV4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retreg3Q9CQV4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.84■■□□□ 1.41
Retreg3Q9CQV4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Retreg3Q9CQV4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.83■■□□□ 1.41
Retreg3Q9CQV4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Retreg3Q9CQV4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retreg3Q9CQV4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.81■■□□□ 1.4
Retreg3Q9CQV4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retreg3Q9CQV4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retreg3Q9CQV4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Retreg3Q9CQV4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retreg3Q9CQV4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retreg3Q9CQV4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retreg3Q9CQV4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Retreg3Q9CQV4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.79■■□□□ 1.4
Retreg3Q9CQV4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retreg3Q9CQV4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Retreg3Q9CQV4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.78■■□□□ 1.4
Retreg3Q9CQV4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retreg3Q9CQV4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retreg3Q9CQV4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retreg3Q9CQV4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retreg3Q9CQV4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.77■■□□□ 1.4
Retreg3Q9CQV4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retreg3Q9CQV4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retreg3Q9CQV4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retreg3Q9CQV4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retreg3Q9CQV4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retreg3Q9CQV4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retreg3Q9CQV4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retreg3Q9CQV4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retreg3Q9CQV4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retreg3Q9CQV4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.75■■□□□ 1.39
Retreg3Q9CQV4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retreg3Q9CQV4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Retreg3Q9CQV4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retreg3Q9CQV4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retreg3Q9CQV4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retreg3Q9CQV4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.73■■□□□ 1.39
Retreg3Q9CQV4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retreg3Q9CQV4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retreg3Q9CQV4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retreg3Q9CQV4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Retreg3Q9CQV4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Retreg3Q9CQV4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.7■■□□□ 1.38
Retreg3Q9CQV4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retreg3Q9CQV4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.69■■□□□ 1.38
Retreg3Q9CQV4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Retreg3Q9CQV4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Retreg3Q9CQV4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Retreg3Q9CQV4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retreg3Q9CQV4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retreg3Q9CQV4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retreg3Q9CQV4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
Retreg3Q9CQV4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.67■■□□□ 1.38
Retreg3Q9CQV4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.67■■□□□ 1.38
Retreg3Q9CQV4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.66■■□□□ 1.38
Retreg3Q9CQV4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Retreg3Q9CQV4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Retreg3Q9CQV4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.65■■□□□ 1.38
Retreg3Q9CQV4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retreg3Q9CQV4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Retreg3Q9CQV4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retreg3Q9CQV4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retreg3Q9CQV4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retreg3Q9CQV4 Gm7432-201ENSMUST00000210343 879 ntBASIC23.63■■□□□ 1.37
Retreg3Q9CQV4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retreg3Q9CQV4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.62■■□□□ 1.37
Retreg3Q9CQV4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retreg3Q9CQV4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retreg3Q9CQV4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retreg3Q9CQV4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retreg3Q9CQV4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retreg3Q9CQV4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Retreg3Q9CQV4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retreg3Q9CQV4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.59■■□□□ 1.37
Retreg3Q9CQV4 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.58■■□□□ 1.37
Retreg3Q9CQV4 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.58■■□□□ 1.37
Retreg3Q9CQV4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retreg3Q9CQV4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Retreg3Q9CQV4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
Retreg3Q9CQV4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Retreg3Q9CQV4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Retreg3Q9CQV4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Retreg3Q9CQV4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retreg3Q9CQV4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retreg3Q9CQV4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Retreg3Q9CQV4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retreg3Q9CQV4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retreg3Q9CQV4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retreg3Q9CQV4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.53■■□□□ 1.36
Retreg3Q9CQV4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retreg3Q9CQV4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retreg3Q9CQV4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Retreg3Q9CQV4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retreg3Q9CQV4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Retreg3Q9CQV4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms