Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.81■■□□□ 1.24
Rnf111Q99ML9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf111Q99ML9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf111Q99ML9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.79■■□□□ 1.24
Rnf111Q99ML9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf111Q99ML9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf111Q99ML9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf111Q99ML9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rnf111Q99ML9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.77■■□□□ 1.24
Rnf111Q99ML9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf111Q99ML9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Rnf111Q99ML9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rnf111Q99ML9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf111Q99ML9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf111Q99ML9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf111Q99ML9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf111Q99ML9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.74■■□□□ 1.23
Rnf111Q99ML9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf111Q99ML9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf111Q99ML9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rnf111Q99ML9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf111Q99ML9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Rnf111Q99ML9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf111Q99ML9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf111Q99ML9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf111Q99ML9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.7■■□□□ 1.22
Rnf111Q99ML9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.7■■□□□ 1.22
Rnf111Q99ML9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Rnf111Q99ML9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf111Q99ML9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf111Q99ML9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf111Q99ML9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf111Q99ML9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf111Q99ML9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf111Q99ML9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rnf111Q99ML9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf111Q99ML9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf111Q99ML9 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.66■■□□□ 1.22
Rnf111Q99ML9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf111Q99ML9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Rnf111Q99ML9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf111Q99ML9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rnf111Q99ML9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf111Q99ML9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf111Q99ML9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf111Q99ML9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf111Q99ML9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf111Q99ML9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf111Q99ML9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf111Q99ML9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rnf111Q99ML9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Rnf111Q99ML9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf111Q99ML9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.61■■□□□ 1.21
Rnf111Q99ML9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf111Q99ML9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf111Q99ML9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf111Q99ML9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rnf111Q99ML9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.59■■□□□ 1.21
Rnf111Q99ML9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf111Q99ML9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf111Q99ML9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf111Q99ML9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf111Q99ML9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Rnf111Q99ML9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf111Q99ML9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rnf111Q99ML9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Rnf111Q99ML9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rnf111Q99ML9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf111Q99ML9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Rnf111Q99ML9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rnf111Q99ML9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.57■■□□□ 1.2
Rnf111Q99ML9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf111Q99ML9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf111Q99ML9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Rnf111Q99ML9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf111Q99ML9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf111Q99ML9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Rnf111Q99ML9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf111Q99ML9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf111Q99ML9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Rnf111Q99ML9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rnf111Q99ML9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rnf111Q99ML9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Rnf111Q99ML9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf111Q99ML9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Rnf111Q99ML9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf111Q99ML9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms