Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb4Q91XZ6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb4Q91XZ6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb4Q91XZ6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb4Q91XZ6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
Pcdhb4Q91XZ6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
Pcdhb4Q91XZ6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb4Q91XZ6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb4Q91XZ6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb4Q91XZ6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb4Q91XZ6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb4Q91XZ6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb4Q91XZ6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
Pcdhb4Q91XZ6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb4Q91XZ6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb4Q91XZ6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhb4Q91XZ6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb4Q91XZ6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pcdhb4Q91XZ6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb4Q91XZ6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhb4Q91XZ6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhb4Q91XZ6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb4Q91XZ6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb4Q91XZ6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdhb4Q91XZ6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Pcdhb4Q91XZ6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb4Q91XZ6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb4Q91XZ6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Pcdhb4Q91XZ6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Pcdhb4Q91XZ6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb4Q91XZ6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb4Q91XZ6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb4Q91XZ6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb4Q91XZ6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb4Q91XZ6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.17■■□□□ 1.3
Pcdhb4Q91XZ6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdhb4Q91XZ6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb4Q91XZ6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb4Q91XZ6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb4Q91XZ6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb4Q91XZ6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb4Q91XZ6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb4Q91XZ6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb4Q91XZ6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.15■■□□□ 1.3
Pcdhb4Q91XZ6 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.15■■□□□ 1.3
Pcdhb4Q91XZ6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb4Q91XZ6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Pcdhb4Q91XZ6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Pcdhb4Q91XZ6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb4Q91XZ6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.13■■□□□ 1.29
Pcdhb4Q91XZ6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb4Q91XZ6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb4Q91XZ6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb4Q91XZ6 Gm30023-201ENSMUST00000197970 889 ntBASIC23.12■■□□□ 1.29
Pcdhb4Q91XZ6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb4Q91XZ6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb4Q91XZ6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb4Q91XZ6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb4Q91XZ6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb4Q91XZ6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdhb4Q91XZ6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb4Q91XZ6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb4Q91XZ6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb4Q91XZ6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Pcdhb4Q91XZ6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Pcdhb4Q91XZ6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb4Q91XZ6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.08■■□□□ 1.29
Pcdhb4Q91XZ6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb4Q91XZ6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Pcdhb4Q91XZ6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb4Q91XZ6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb4Q91XZ6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb4Q91XZ6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Pcdhb4Q91XZ6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb4Q91XZ6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb4Q91XZ6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhb4Q91XZ6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb4Q91XZ6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.04■■□□□ 1.28
Pcdhb4Q91XZ6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb4Q91XZ6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb4Q91XZ6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.03■■□□□ 1.28
Pcdhb4Q91XZ6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb4Q91XZ6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb4Q91XZ6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb4Q91XZ6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb4Q91XZ6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.02■■□□□ 1.28
Pcdhb4Q91XZ6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb4Q91XZ6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb4Q91XZ6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.01■■□□□ 1.27
Pcdhb4Q91XZ6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb4Q91XZ6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb4Q91XZ6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Pcdhb4Q91XZ6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23■■□□□ 1.27
Pcdhb4Q91XZ6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb4Q91XZ6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb4Q91XZ6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb4Q91XZ6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb4Q91XZ6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb4Q91XZ6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb4Q91XZ6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms