Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf113a1Q8R3P8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf113a1Q8R3P8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf113a1Q8R3P8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf113a1Q8R3P8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf113a1Q8R3P8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf113a1Q8R3P8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.47■□□□□ 0.87
Rnf113a1Q8R3P8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf113a1Q8R3P8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf113a1Q8R3P8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Rnf113a1Q8R3P8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.46■□□□□ 0.87
Rnf113a1Q8R3P8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf113a1Q8R3P8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Rnf113a1Q8R3P8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf113a1Q8R3P8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf113a1Q8R3P8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Rnf113a1Q8R3P8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf113a1Q8R3P8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.44■□□□□ 0.86
Rnf113a1Q8R3P8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf113a1Q8R3P8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf113a1Q8R3P8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf113a1Q8R3P8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf113a1Q8R3P8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf113a1Q8R3P8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf113a1Q8R3P8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Rnf113a1Q8R3P8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf113a1Q8R3P8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rnf113a1Q8R3P8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf113a1Q8R3P8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf113a1Q8R3P8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf113a1Q8R3P8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf113a1Q8R3P8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf113a1Q8R3P8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.4■□□□□ 0.86
Rnf113a1Q8R3P8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.39■□□□□ 0.86
Rnf113a1Q8R3P8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.39■□□□□ 0.86
Rnf113a1Q8R3P8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rnf113a1Q8R3P8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf113a1Q8R3P8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf113a1Q8R3P8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf113a1Q8R3P8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rnf113a1Q8R3P8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.37■□□□□ 0.85
Rnf113a1Q8R3P8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf113a1Q8R3P8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf113a1Q8R3P8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.36■□□□□ 0.85
Rnf113a1Q8R3P8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf113a1Q8R3P8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf113a1Q8R3P8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rnf113a1Q8R3P8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf113a1Q8R3P8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf113a1Q8R3P8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rnf113a1Q8R3P8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf113a1Q8R3P8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf113a1Q8R3P8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rnf113a1Q8R3P8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rnf113a1Q8R3P8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rnf113a1Q8R3P8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf113a1Q8R3P8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf113a1Q8R3P8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf113a1Q8R3P8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.31■□□□□ 0.84
Rnf113a1Q8R3P8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf113a1Q8R3P8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Rnf113a1Q8R3P8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf113a1Q8R3P8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf113a1Q8R3P8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf113a1Q8R3P8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rnf113a1Q8R3P8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rnf113a1Q8R3P8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf113a1Q8R3P8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rnf113a1Q8R3P8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rnf113a1Q8R3P8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf113a1Q8R3P8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.28■□□□□ 0.84
Rnf113a1Q8R3P8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf113a1Q8R3P8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf113a1Q8R3P8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.27■□□□□ 0.84
Rnf113a1Q8R3P8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf113a1Q8R3P8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rnf113a1Q8R3P8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.27■□□□□ 0.84
Rnf113a1Q8R3P8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rnf113a1Q8R3P8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf113a1Q8R3P8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rnf113a1Q8R3P8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf113a1Q8R3P8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf113a1Q8R3P8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf113a1Q8R3P8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf113a1Q8R3P8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf113a1Q8R3P8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.25■□□□□ 0.83
Rnf113a1Q8R3P8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf113a1Q8R3P8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rnf113a1Q8R3P8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.24■□□□□ 0.83
Rnf113a1Q8R3P8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rnf113a1Q8R3P8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf113a1Q8R3P8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf113a1Q8R3P8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rnf113a1Q8R3P8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms