Protein–RNA interactions for Protein: Q8R040

Rpp21, Ribonuclease P protein subunit p21, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp21Q8R040 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp21Q8R040 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Rpp21Q8R040 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp21Q8R040 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp21Q8R040 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp21Q8R040 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp21Q8R040 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp21Q8R040 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rpp21Q8R040 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.29■□□□□ 0.68
Rpp21Q8R040 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp21Q8R040 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpp21Q8R040 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp21Q8R040 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp21Q8R040 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpp21Q8R040 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp21Q8R040 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp21Q8R040 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Rpp21Q8R040 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rpp21Q8R040 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp21Q8R040 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp21Q8R040 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp21Q8R040 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.25■□□□□ 0.67
Rpp21Q8R040 Zfp131-205ENSMUST00000223812 663 ntBASIC19.25■□□□□ 0.67
Rpp21Q8R040 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp21Q8R040 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpp21Q8R040 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp21Q8R040 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp21Q8R040 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp21Q8R040 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.24■□□□□ 0.67
Rpp21Q8R040 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp21Q8R040 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpp21Q8R040 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp21Q8R040 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp21Q8R040 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Rpp21Q8R040 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp21Q8R040 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp21Q8R040 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp21Q8R040 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp21Q8R040 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp21Q8R040 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpp21Q8R040 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp21Q8R040 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rpp21Q8R040 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp21Q8R040 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp21Q8R040 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpp21Q8R040 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Rpp21Q8R040 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.19■□□□□ 0.66
Rpp21Q8R040 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp21Q8R040 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.18■□□□□ 0.66
Rpp21Q8R040 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp21Q8R040 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp21Q8R040 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp21Q8R040 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp21Q8R040 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.17■□□□□ 0.66
Rpp21Q8R040 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp21Q8R040 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp21Q8R040 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp21Q8R040 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp21Q8R040 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.16■□□□□ 0.66
Rpp21Q8R040 Gm24970-201ENSMUST00000175582 82 ntBASIC19.16■□□□□ 0.66
Rpp21Q8R040 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp21Q8R040 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpp21Q8R040 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rpp21Q8R040 Gm9397-201ENSMUST00000200125 605 ntBASIC19.14■□□□□ 0.65
Rpp21Q8R040 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp21Q8R040 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpp21Q8R040 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp21Q8R040 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp21Q8R040 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp21Q8R040 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Rpp21Q8R040 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpp21Q8R040 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rpp21Q8R040 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp21Q8R040 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp21Q8R040 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpp21Q8R040 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.12■□□□□ 0.65
Rpp21Q8R040 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rpp21Q8R040 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp21Q8R040 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp21Q8R040 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp21Q8R040 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp21Q8R040 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpp21Q8R040 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rpp21Q8R040 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp21Q8R040 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp21Q8R040 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp21Q8R040 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp21Q8R040 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms