Protein–RNA interactions for Protein: Q8K441

Abca6, ATP-binding cassette sub-family A member 6, mousemouse

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca6Q8K441 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC35,22■■■■□ 3,23
Abca6Q8K441 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC35,22■■■■□ 3,23
Abca6Q8K441 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC35,21■■■■□ 3,23
Abca6Q8K441 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Abca6Q8K441 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC35,2■■■■□ 3,23
Abca6Q8K441 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC35,19■■■■□ 3,22
Abca6Q8K441 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC35,19■■■■□ 3,22
Abca6Q8K441 Gm45364-201ENSMUST00000210883 159 ntBASIC35,17■■■■□ 3,22
Abca6Q8K441 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC35,16■■■■□ 3,22
Abca6Q8K441 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC35,16■■■■□ 3,22
Abca6Q8K441 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC35,16■■■■□ 3,22
Abca6Q8K441 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC35,15■■■■□ 3,22
Abca6Q8K441 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC35,14■■■■□ 3,22
Abca6Q8K441 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC35,14■■■■□ 3,22
Abca6Q8K441 AC154454.1-201ENSMUST00000225253 216 ntBASIC35,14■■■■□ 3,22
Abca6Q8K441 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC35,12■■■■□ 3,21
Abca6Q8K441 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC35,11■■■■□ 3,21
Abca6Q8K441 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC35,1■■■■□ 3,21
Abca6Q8K441 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC35,1■■■■□ 3,21
Abca6Q8K441 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Abca6Q8K441 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC35,1■■■■□ 3,21
Abca6Q8K441 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC35,09■■■■□ 3,21
Abca6Q8K441 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC35,09■■■■□ 3,21
Abca6Q8K441 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC35,09■■■■□ 3,21
Abca6Q8K441 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC35,07■■■■□ 3,2
Abca6Q8K441 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC35,06■■■■□ 3,2
Abca6Q8K441 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC35,06■■■■□ 3,2
Abca6Q8K441 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC35,05■■■■□ 3,2
Abca6Q8K441 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC35,04■■■■□ 3,2
Abca6Q8K441 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC35,04■■■■□ 3,2
Abca6Q8K441 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC35,03■■■■□ 3,2
Abca6Q8K441 Gm5812-201ENSMUST00000061073 957 ntBASIC35,03■■■■□ 3,2
Abca6Q8K441 Pcf11-205ENSMUST00000208255 1720 ntBASIC35,02■■■■□ 3,2
Abca6Q8K441 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC35,02■■■■□ 3,2
Abca6Q8K441 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC35,01■■■■□ 3,2
Abca6Q8K441 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC35■■■■□ 3,19
Abca6Q8K441 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC34,99■■■■□ 3,19
Abca6Q8K441 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC34,99■■■■□ 3,19
Abca6Q8K441 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC34,98■■■■□ 3,19
Abca6Q8K441 Mir3960-201ENSMUST00000198213 73 ntBASIC34,98■■■■□ 3,19
Abca6Q8K441 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC34,97■■■■□ 3,19
Abca6Q8K441 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC34,96■■■■□ 3,19
Abca6Q8K441 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC34,96■■■■□ 3,19
Abca6Q8K441 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC34,96■■■■□ 3,19
Abca6Q8K441 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC34,95■■■■□ 3,18
Abca6Q8K441 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC34,95■■■■□ 3,18
Abca6Q8K441 Gm14523-201ENSMUST00000117260 558 ntBASIC34,94■■■■□ 3,18
Abca6Q8K441 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC34,94■■■■□ 3,18
Abca6Q8K441 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC34,94■■■■□ 3,18
Abca6Q8K441 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC34,93■■■■□ 3,18
Abca6Q8K441 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC34,93■■■■□ 3,18
Abca6Q8K441 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC34,93■■■■□ 3,18
Abca6Q8K441 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC34,92■■■■□ 3,18
Abca6Q8K441 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,92■■■■□ 3,18
Abca6Q8K441 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC34,92■■■■□ 3,18
Abca6Q8K441 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC34,91■■■■□ 3,18
Abca6Q8K441 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC34,9■■■■□ 3,18
Abca6Q8K441 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC34,9■■■■□ 3,18
Abca6Q8K441 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC34,89■■■■□ 3,18
Abca6Q8K441 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC34,88■■■■□ 3,17
Abca6Q8K441 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC34,87■■■■□ 3,17
Abca6Q8K441 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC34,87■■■■□ 3,17
Abca6Q8K441 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC34,87■■■■□ 3,17
Abca6Q8K441 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC34,87■■■■□ 3,17
Abca6Q8K441 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC34,86■■■■□ 3,17
Abca6Q8K441 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC34,85■■■■□ 3,17
Abca6Q8K441 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC34,85■■■■□ 3,17
Abca6Q8K441 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC34,85■■■■□ 3,17
Abca6Q8K441 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC34,83■■■■□ 3,17
Abca6Q8K441 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC34,83■■■■□ 3,17
Abca6Q8K441 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC34,82■■■■□ 3,16
Abca6Q8K441 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC34,82■■■■□ 3,16
Abca6Q8K441 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC34,81■■■■□ 3,16
Abca6Q8K441 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC34,8■■■■□ 3,16
Abca6Q8K441 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC34,79■■■■□ 3,16
Abca6Q8K441 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC34,78■■■■□ 3,16
Abca6Q8K441 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC34,78■■■■□ 3,16
Abca6Q8K441 AC151971.4-201ENSMUST00000214717 704 ntBASIC34,77■■■■□ 3,16
Abca6Q8K441 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC34,77■■■■□ 3,16
Abca6Q8K441 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC34,77■■■■□ 3,16
Abca6Q8K441 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC34,76■■■■□ 3,16
Abca6Q8K441 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC34,76■■■■□ 3,15
Abca6Q8K441 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC34,76■■■■□ 3,15
Abca6Q8K441 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC34,75■■■■□ 3,15
Abca6Q8K441 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC34,75■■■■□ 3,15
Abca6Q8K441 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC34,75■■■■□ 3,15
Abca6Q8K441 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Abca6Q8K441 Gm5921-201ENSMUST00000075898 882 ntBASIC34,73■■■■□ 3,15
Abca6Q8K441 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC34,73■■■■□ 3,15
Abca6Q8K441 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC34,73■■■■□ 3,15
Abca6Q8K441 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC34,72■■■■□ 3,15
Abca6Q8K441 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC34,71■■■■□ 3,15
Abca6Q8K441 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC34,7■■■■□ 3,15
Abca6Q8K441 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC34,7■■■■□ 3,15
Abca6Q8K441 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC34,7■■■■□ 3,14
Abca6Q8K441 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC34,69■■■■□ 3,14
Abca6Q8K441 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC34,69■■■■□ 3,14
Abca6Q8K441 Gm5067-201ENSMUST00000170449 1009 ntBASIC34,69■■■■□ 3,14
Abca6Q8K441 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC34,69■■■■□ 3,14
Abca6Q8K441 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC34,68■■■■□ 3,14
Retrieved 100 of 76,532 protein–RNA pairs in 50,2 ms