Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
Rnf170Q8CBG9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf170Q8CBG9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf170Q8CBG9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rnf170Q8CBG9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf170Q8CBG9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Rnf170Q8CBG9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.79■□□□□ 0.76
Rnf170Q8CBG9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf170Q8CBG9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf170Q8CBG9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf170Q8CBG9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rnf170Q8CBG9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf170Q8CBG9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf170Q8CBG9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Rnf170Q8CBG9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.76■□□□□ 0.75
Rnf170Q8CBG9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf170Q8CBG9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf170Q8CBG9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf170Q8CBG9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf170Q8CBG9 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.74■□□□□ 0.75
Rnf170Q8CBG9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Rnf170Q8CBG9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf170Q8CBG9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf170Q8CBG9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf170Q8CBG9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf170Q8CBG9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf170Q8CBG9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf170Q8CBG9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf170Q8CBG9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf170Q8CBG9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf170Q8CBG9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf170Q8CBG9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf170Q8CBG9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf170Q8CBG9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf170Q8CBG9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf170Q8CBG9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf170Q8CBG9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf170Q8CBG9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf170Q8CBG9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf170Q8CBG9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf170Q8CBG9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Rnf170Q8CBG9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf170Q8CBG9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf170Q8CBG9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf170Q8CBG9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf170Q8CBG9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf170Q8CBG9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf170Q8CBG9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf170Q8CBG9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf170Q8CBG9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf170Q8CBG9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf170Q8CBG9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf170Q8CBG9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf170Q8CBG9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf170Q8CBG9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf170Q8CBG9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf170Q8CBG9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rnf170Q8CBG9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf170Q8CBG9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf170Q8CBG9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rnf170Q8CBG9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf170Q8CBG9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf170Q8CBG9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf170Q8CBG9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf170Q8CBG9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf170Q8CBG9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf170Q8CBG9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf170Q8CBG9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf170Q8CBG9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Rnf170Q8CBG9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf170Q8CBG9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf170Q8CBG9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rnf170Q8CBG9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf170Q8CBG9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf170Q8CBG9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf170Q8CBG9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf170Q8CBG9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf170Q8CBG9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf170Q8CBG9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf170Q8CBG9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf170Q8CBG9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rnf170Q8CBG9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf170Q8CBG9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf170Q8CBG9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rnf170Q8CBG9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Rnf170Q8CBG9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf170Q8CBG9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf170Q8CBG9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf170Q8CBG9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.53■□□□□ 0.72
Rnf170Q8CBG9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf170Q8CBG9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf170Q8CBG9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.52■□□□□ 0.72
Rnf170Q8CBG9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf170Q8CBG9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms