Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.99■■■□□ 2.07
Shisa4Q8CA71 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Shisa4Q8CA71 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Shisa4Q8CA71 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Shisa4Q8CA71 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Shisa4Q8CA71 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
Shisa4Q8CA71 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Shisa4Q8CA71 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.95■■■□□ 2.07
Shisa4Q8CA71 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
Shisa4Q8CA71 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Shisa4Q8CA71 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Shisa4Q8CA71 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
Shisa4Q8CA71 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Shisa4Q8CA71 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Shisa4Q8CA71 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.9■■■□□ 2.06
Shisa4Q8CA71 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Shisa4Q8CA71 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Shisa4Q8CA71 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
Shisa4Q8CA71 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Shisa4Q8CA71 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Shisa4Q8CA71 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Shisa4Q8CA71 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.86■■■□□ 2.05
Shisa4Q8CA71 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Shisa4Q8CA71 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Shisa4Q8CA71 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Shisa4Q8CA71 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Shisa4Q8CA71 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.84■■■□□ 2.05
Shisa4Q8CA71 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Shisa4Q8CA71 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Shisa4Q8CA71 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
Shisa4Q8CA71 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Shisa4Q8CA71 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Shisa4Q8CA71 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Shisa4Q8CA71 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Shisa4Q8CA71 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Shisa4Q8CA71 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Shisa4Q8CA71 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.77■■■□□ 2.04
Shisa4Q8CA71 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Shisa4Q8CA71 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.76■■■□□ 2.04
Shisa4Q8CA71 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Shisa4Q8CA71 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Shisa4Q8CA71 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Shisa4Q8CA71 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Shisa4Q8CA71 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shisa4Q8CA71 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.74■■■□□ 2.03
Shisa4Q8CA71 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.74■■■□□ 2.03
Shisa4Q8CA71 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Shisa4Q8CA71 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Shisa4Q8CA71 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.73■■■□□ 2.03
Shisa4Q8CA71 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Shisa4Q8CA71 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Shisa4Q8CA71 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Shisa4Q8CA71 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Shisa4Q8CA71 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Shisa4Q8CA71 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Shisa4Q8CA71 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.7■■■□□ 2.02
Shisa4Q8CA71 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Shisa4Q8CA71 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Shisa4Q8CA71 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Shisa4Q8CA71 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.69■■■□□ 2.02
Shisa4Q8CA71 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Shisa4Q8CA71 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Shisa4Q8CA71 Particl-201ENSMUST00000205370 1560 ntBASIC27.67■■■□□ 2.02
Shisa4Q8CA71 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Shisa4Q8CA71 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Shisa4Q8CA71 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Shisa4Q8CA71 Gm7432-201ENSMUST00000210343 879 ntBASIC27.65■■■□□ 2.02
Shisa4Q8CA71 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Shisa4Q8CA71 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Shisa4Q8CA71 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Shisa4Q8CA71 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Shisa4Q8CA71 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Shisa4Q8CA71 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.63■■■□□ 2.01
Shisa4Q8CA71 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.63■■■□□ 2.01
Shisa4Q8CA71 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Shisa4Q8CA71 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Shisa4Q8CA71 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
Shisa4Q8CA71 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Shisa4Q8CA71 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Shisa4Q8CA71 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.6■■■□□ 2.01
Shisa4Q8CA71 Gm37136-201ENSMUST00000194368 194 ntBASIC27.6■■■□□ 2.01
Shisa4Q8CA71 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Shisa4Q8CA71 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.59■■■□□ 2.01
Shisa4Q8CA71 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
Shisa4Q8CA71 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Shisa4Q8CA71 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.59■■■□□ 2.01
Shisa4Q8CA71 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Shisa4Q8CA71 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Shisa4Q8CA71 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Shisa4Q8CA71 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Shisa4Q8CA71 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Shisa4Q8CA71 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Shisa4Q8CA71 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.57■■■□□ 2
Shisa4Q8CA71 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms