Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3rf3Q8C120 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3rf3Q8C120 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.61■■□□□ 1.53
Sh3rf3Q8C120 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3rf3Q8C120 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3rf3Q8C120 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3rf3Q8C120 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Sh3rf3Q8C120 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sh3rf3Q8C120 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.58■■□□□ 1.53
Sh3rf3Q8C120 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Sh3rf3Q8C120 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.58■■□□□ 1.52
Sh3rf3Q8C120 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3rf3Q8C120 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3rf3Q8C120 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3rf3Q8C120 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3rf3Q8C120 Nkain2-201ENSMUST00000092602 558 ntBASIC24.57■■□□□ 1.52
Sh3rf3Q8C120 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3rf3Q8C120 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3rf3Q8C120 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3rf3Q8C120 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.56■■□□□ 1.52
Sh3rf3Q8C120 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3rf3Q8C120 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.55■■□□□ 1.52
Sh3rf3Q8C120 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3rf3Q8C120 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Sh3rf3Q8C120 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Sh3rf3Q8C120 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.54■■□□□ 1.52
Sh3rf3Q8C120 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3rf3Q8C120 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3rf3Q8C120 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3rf3Q8C120 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3rf3Q8C120 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3rf3Q8C120 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3rf3Q8C120 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.5■■□□□ 1.51
Sh3rf3Q8C120 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3rf3Q8C120 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3rf3Q8C120 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.48■■□□□ 1.51
Sh3rf3Q8C120 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Sh3rf3Q8C120 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3rf3Q8C120 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Sh3rf3Q8C120 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3rf3Q8C120 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.46■■□□□ 1.51
Sh3rf3Q8C120 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3rf3Q8C120 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.45■■□□□ 1.5
Sh3rf3Q8C120 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3rf3Q8C120 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3rf3Q8C120 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Sh3rf3Q8C120 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.45■■□□□ 1.5
Sh3rf3Q8C120 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.45■■□□□ 1.5
Sh3rf3Q8C120 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3rf3Q8C120 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3rf3Q8C120 Gm6821-201ENSMUST00000107540 542 ntBASIC24.43■■□□□ 1.5
Sh3rf3Q8C120 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3rf3Q8C120 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3rf3Q8C120 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.4■■□□□ 1.5
Sh3rf3Q8C120 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf3Q8C120 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf3Q8C120 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf3Q8C120 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sh3rf3Q8C120 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.39■■□□□ 1.49
Sh3rf3Q8C120 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sh3rf3Q8C120 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Sh3rf3Q8C120 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Sh3rf3Q8C120 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Sh3rf3Q8C120 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.37■■□□□ 1.49
Sh3rf3Q8C120 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.36■■□□□ 1.49
Sh3rf3Q8C120 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3rf3Q8C120 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3rf3Q8C120 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3rf3Q8C120 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3rf3Q8C120 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Sh3rf3Q8C120 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh3rf3Q8C120 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh3rf3Q8C120 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.33■■□□□ 1.49
Sh3rf3Q8C120 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sh3rf3Q8C120 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf3Q8C120 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.31■■□□□ 1.48
Sh3rf3Q8C120 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf3Q8C120 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Sh3rf3Q8C120 Gm8503-201ENSMUST00000118131 455 ntBASIC24.29■■□□□ 1.48
Sh3rf3Q8C120 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.29■■□□□ 1.48
Sh3rf3Q8C120 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.29■■□□□ 1.48
Sh3rf3Q8C120 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3rf3Q8C120 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.28■■□□□ 1.48
Sh3rf3Q8C120 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3rf3Q8C120 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3rf3Q8C120 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3rf3Q8C120 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3rf3Q8C120 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.26■■□□□ 1.47
Sh3rf3Q8C120 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.26■■□□□ 1.47
Sh3rf3Q8C120 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3rf3Q8C120 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3rf3Q8C120 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Sh3rf3Q8C120 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms