Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SprnQ8BWU1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SprnQ8BWU1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
SprnQ8BWU1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SprnQ8BWU1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SprnQ8BWU1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SprnQ8BWU1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SprnQ8BWU1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SprnQ8BWU1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SprnQ8BWU1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SprnQ8BWU1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.95■□□□□ 0.94
SprnQ8BWU1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SprnQ8BWU1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SprnQ8BWU1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SprnQ8BWU1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.94■□□□□ 0.94
SprnQ8BWU1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SprnQ8BWU1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SprnQ8BWU1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SprnQ8BWU1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SprnQ8BWU1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SprnQ8BWU1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SprnQ8BWU1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SprnQ8BWU1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SprnQ8BWU1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
SprnQ8BWU1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SprnQ8BWU1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SprnQ8BWU1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SprnQ8BWU1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SprnQ8BWU1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SprnQ8BWU1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.91■□□□□ 0.94
SprnQ8BWU1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SprnQ8BWU1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.9■□□□□ 0.94
SprnQ8BWU1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.9■□□□□ 0.94
SprnQ8BWU1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SprnQ8BWU1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.9■□□□□ 0.94
SprnQ8BWU1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SprnQ8BWU1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SprnQ8BWU1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SprnQ8BWU1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SprnQ8BWU1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SprnQ8BWU1 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.88■□□□□ 0.93
SprnQ8BWU1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SprnQ8BWU1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SprnQ8BWU1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SprnQ8BWU1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SprnQ8BWU1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SprnQ8BWU1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SprnQ8BWU1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SprnQ8BWU1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SprnQ8BWU1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SprnQ8BWU1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SprnQ8BWU1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SprnQ8BWU1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SprnQ8BWU1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SprnQ8BWU1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SprnQ8BWU1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SprnQ8BWU1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SprnQ8BWU1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.83■□□□□ 0.93
SprnQ8BWU1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SprnQ8BWU1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SprnQ8BWU1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SprnQ8BWU1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SprnQ8BWU1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SprnQ8BWU1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SprnQ8BWU1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SprnQ8BWU1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SprnQ8BWU1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SprnQ8BWU1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SprnQ8BWU1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SprnQ8BWU1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SprnQ8BWU1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SprnQ8BWU1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SprnQ8BWU1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.8■□□□□ 0.92
SprnQ8BWU1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SprnQ8BWU1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SprnQ8BWU1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SprnQ8BWU1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.79■□□□□ 0.92
SprnQ8BWU1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SprnQ8BWU1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.78■□□□□ 0.92
SprnQ8BWU1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SprnQ8BWU1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SprnQ8BWU1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SprnQ8BWU1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SprnQ8BWU1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SprnQ8BWU1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SprnQ8BWU1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SprnQ8BWU1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SprnQ8BWU1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SprnQ8BWU1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SprnQ8BWU1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SprnQ8BWU1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SprnQ8BWU1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SprnQ8BWU1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SprnQ8BWU1 Gm45855-201ENSMUST00000212546 880 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms