Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.11■□□□□ 0.97
Cpne4Q8BLR2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne4Q8BLR2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpne4Q8BLR2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cpne4Q8BLR2 Gm7432-201ENSMUST00000210343 879 ntBASIC21.09■□□□□ 0.97
Cpne4Q8BLR2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpne4Q8BLR2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.08■□□□□ 0.97
Cpne4Q8BLR2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.08■□□□□ 0.96
Cpne4Q8BLR2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Cpne4Q8BLR2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne4Q8BLR2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cpne4Q8BLR2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cpne4Q8BLR2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpne4Q8BLR2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cpne4Q8BLR2 Particl-201ENSMUST00000205370 1560 ntBASIC21.06■□□□□ 0.96
Cpne4Q8BLR2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne4Q8BLR2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpne4Q8BLR2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpne4Q8BLR2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpne4Q8BLR2 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.04■□□□□ 0.96
Cpne4Q8BLR2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
Cpne4Q8BLR2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne4Q8BLR2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpne4Q8BLR2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpne4Q8BLR2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne4Q8BLR2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne4Q8BLR2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpne4Q8BLR2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.01■□□□□ 0.95
Cpne4Q8BLR2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21■□□□□ 0.95
Cpne4Q8BLR2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpne4Q8BLR2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cpne4Q8BLR2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.99■□□□□ 0.95
Cpne4Q8BLR2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.99■□□□□ 0.95
Cpne4Q8BLR2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpne4Q8BLR2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.97■□□□□ 0.95
Cpne4Q8BLR2 Gm11599-201ENSMUST00000118720 878 ntBASIC20.97■□□□□ 0.95
Cpne4Q8BLR2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.97■□□□□ 0.95
Cpne4Q8BLR2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne4Q8BLR2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpne4Q8BLR2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.95■□□□□ 0.94
Cpne4Q8BLR2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpne4Q8BLR2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
Cpne4Q8BLR2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.93■□□□□ 0.94
Cpne4Q8BLR2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpne4Q8BLR2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cpne4Q8BLR2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpne4Q8BLR2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne4Q8BLR2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpne4Q8BLR2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpne4Q8BLR2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne4Q8BLR2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne4Q8BLR2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne4Q8BLR2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpne4Q8BLR2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne4Q8BLR2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne4Q8BLR2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpne4Q8BLR2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne4Q8BLR2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpne4Q8BLR2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpne4Q8BLR2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne4Q8BLR2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpne4Q8BLR2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cpne4Q8BLR2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpne4Q8BLR2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpne4Q8BLR2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpne4Q8BLR2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.83■□□□□ 0.93
Cpne4Q8BLR2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne4Q8BLR2 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.82■□□□□ 0.92
Cpne4Q8BLR2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cpne4Q8BLR2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpne4Q8BLR2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne4Q8BLR2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cpne4Q8BLR2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cpne4Q8BLR2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne4Q8BLR2 Gm37136-201ENSMUST00000194368 194 ntBASIC20.8■□□□□ 0.92
Cpne4Q8BLR2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cpne4Q8BLR2 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.79■□□□□ 0.92
Cpne4Q8BLR2 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.79■□□□□ 0.92
Cpne4Q8BLR2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne4Q8BLR2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne4Q8BLR2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cpne4Q8BLR2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.77■□□□□ 0.92
Cpne4Q8BLR2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.77■□□□□ 0.92
Cpne4Q8BLR2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cpne4Q8BLR2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne4Q8BLR2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.76■□□□□ 0.91
Cpne4Q8BLR2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne4Q8BLR2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne4Q8BLR2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne4Q8BLR2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cpne4Q8BLR2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne4Q8BLR2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne4Q8BLR2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne4Q8BLR2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 156.8 ms