Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.51■■□□□ 1.03
Rab39aQ8BHD0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab39aQ8BHD0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab39aQ8BHD0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.5■■□□□ 1.03
Rab39aQ8BHD0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab39aQ8BHD0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab39aQ8BHD0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Rab39aQ8BHD0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab39aQ8BHD0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rab39aQ8BHD0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab39aQ8BHD0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab39aQ8BHD0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab39aQ8BHD0 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.48■■□□□ 1.03
Rab39aQ8BHD0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab39aQ8BHD0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab39aQ8BHD0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab39aQ8BHD0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab39aQ8BHD0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab39aQ8BHD0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab39aQ8BHD0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Rab39aQ8BHD0 Gm24970-201ENSMUST00000175582 82 ntBASIC21.46■■□□□ 1.03
Rab39aQ8BHD0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab39aQ8BHD0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rab39aQ8BHD0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab39aQ8BHD0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab39aQ8BHD0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab39aQ8BHD0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab39aQ8BHD0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rab39aQ8BHD0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rab39aQ8BHD0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rab39aQ8BHD0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.43■■□□□ 1.02
Rab39aQ8BHD0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab39aQ8BHD0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab39aQ8BHD0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rab39aQ8BHD0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rab39aQ8BHD0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rab39aQ8BHD0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab39aQ8BHD0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
Rab39aQ8BHD0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab39aQ8BHD0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab39aQ8BHD0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rab39aQ8BHD0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rab39aQ8BHD0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab39aQ8BHD0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rab39aQ8BHD0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rab39aQ8BHD0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.38■■□□□ 1.01
Rab39aQ8BHD0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rab39aQ8BHD0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.38■■□□□ 1.01
Rab39aQ8BHD0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab39aQ8BHD0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rab39aQ8BHD0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Rab39aQ8BHD0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rab39aQ8BHD0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab39aQ8BHD0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab39aQ8BHD0 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.36■■□□□ 1.01
Rab39aQ8BHD0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab39aQ8BHD0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab39aQ8BHD0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab39aQ8BHD0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab39aQ8BHD0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab39aQ8BHD0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab39aQ8BHD0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rab39aQ8BHD0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab39aQ8BHD0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rab39aQ8BHD0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab39aQ8BHD0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.33■■□□□ 1.01
Rab39aQ8BHD0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rab39aQ8BHD0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rab39aQ8BHD0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Rab39aQ8BHD0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab39aQ8BHD0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rab39aQ8BHD0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab39aQ8BHD0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab39aQ8BHD0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rab39aQ8BHD0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rab39aQ8BHD0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rab39aQ8BHD0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.3■■□□□ 1
Rab39aQ8BHD0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rab39aQ8BHD0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rab39aQ8BHD0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rab39aQ8BHD0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms