Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
Depdc1bQ8BH88 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Depdc1bQ8BH88 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.47■■□□□ 1.67
Depdc1bQ8BH88 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Depdc1bQ8BH88 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Depdc1bQ8BH88 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Depdc1bQ8BH88 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Depdc1bQ8BH88 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Depdc1bQ8BH88 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Depdc1bQ8BH88 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Depdc1bQ8BH88 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Depdc1bQ8BH88 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Depdc1bQ8BH88 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Depdc1bQ8BH88 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Depdc1bQ8BH88 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Depdc1bQ8BH88 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Depdc1bQ8BH88 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Depdc1bQ8BH88 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Depdc1bQ8BH88 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.39■■□□□ 1.65
Depdc1bQ8BH88 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Depdc1bQ8BH88 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Depdc1bQ8BH88 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Depdc1bQ8BH88 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Depdc1bQ8BH88 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Depdc1bQ8BH88 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Depdc1bQ8BH88 Gm7432-201ENSMUST00000210343 879 ntBASIC25.34■■□□□ 1.65
Depdc1bQ8BH88 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
Depdc1bQ8BH88 Gm30023-201ENSMUST00000197970 889 ntBASIC25.33■■□□□ 1.65
Depdc1bQ8BH88 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.33■■□□□ 1.65
Depdc1bQ8BH88 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Depdc1bQ8BH88 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
Depdc1bQ8BH88 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Depdc1bQ8BH88 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.28■■□□□ 1.64
Depdc1bQ8BH88 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Depdc1bQ8BH88 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.26■■□□□ 1.63
Depdc1bQ8BH88 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Depdc1bQ8BH88 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1bQ8BH88 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Depdc1bQ8BH88 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Depdc1bQ8BH88 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Depdc1bQ8BH88 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.24■■□□□ 1.63
Depdc1bQ8BH88 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Depdc1bQ8BH88 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Depdc1bQ8BH88 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Depdc1bQ8BH88 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Depdc1bQ8BH88 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Depdc1bQ8BH88 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Depdc1bQ8BH88 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.19■■□□□ 1.62
Depdc1bQ8BH88 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Depdc1bQ8BH88 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1bQ8BH88 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1bQ8BH88 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Depdc1bQ8BH88 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Depdc1bQ8BH88 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms