Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13bQ80TY5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps13bQ80TY5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13bQ80TY5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13bQ80TY5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13bQ80TY5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps13bQ80TY5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.71□□□□□ -0.05
Vps13bQ80TY5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps13bQ80TY5 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps13bQ80TY5 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.7□□□□□ -0.06
Vps13bQ80TY5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps13bQ80TY5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.7□□□□□ -0.06
Vps13bQ80TY5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps13bQ80TY5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps13bQ80TY5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps13bQ80TY5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Vps13bQ80TY5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps13bQ80TY5 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.68□□□□□ -0.06
Vps13bQ80TY5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps13bQ80TY5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps13bQ80TY5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps13bQ80TY5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps13bQ80TY5 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.67□□□□□ -0.06
Vps13bQ80TY5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps13bQ80TY5 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.67□□□□□ -0.06
Vps13bQ80TY5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps13bQ80TY5 Gm6658-202ENSMUST00000209493 1885 ntBASIC14.66□□□□□ -0.06
Vps13bQ80TY5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps13bQ80TY5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps13bQ80TY5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vps13bQ80TY5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps13bQ80TY5 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.66□□□□□ -0.06
Vps13bQ80TY5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps13bQ80TY5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps13bQ80TY5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps13bQ80TY5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
Vps13bQ80TY5 Mir3960-201ENSMUST00000198213 73 ntBASIC14.65□□□□□ -0.06
Vps13bQ80TY5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps13bQ80TY5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps13bQ80TY5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps13bQ80TY5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps13bQ80TY5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.63□□□□□ -0.07
Vps13bQ80TY5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vps13bQ80TY5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vps13bQ80TY5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps13bQ80TY5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vps13bQ80TY5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vps13bQ80TY5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.62□□□□□ -0.07
Vps13bQ80TY5 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.62□□□□□ -0.07
Vps13bQ80TY5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.62□□□□□ -0.07
Vps13bQ80TY5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vps13bQ80TY5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13bQ80TY5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13bQ80TY5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.61□□□□□ -0.07
Vps13bQ80TY5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vps13bQ80TY5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vps13bQ80TY5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.6□□□□□ -0.07
Vps13bQ80TY5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vps13bQ80TY5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.59□□□□□ -0.07
Vps13bQ80TY5 Gm5921-201ENSMUST00000075898 882 ntBASIC14.59□□□□□ -0.07
Vps13bQ80TY5 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.59□□□□□ -0.07
Vps13bQ80TY5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.59□□□□□ -0.07
Vps13bQ80TY5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps13bQ80TY5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vps13bQ80TY5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps13bQ80TY5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13bQ80TY5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vps13bQ80TY5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.58□□□□□ -0.08
Vps13bQ80TY5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.58□□□□□ -0.08
Vps13bQ80TY5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.58□□□□□ -0.08
Vps13bQ80TY5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vps13bQ80TY5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13bQ80TY5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vps13bQ80TY5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13bQ80TY5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vps13bQ80TY5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Vps13bQ80TY5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13bQ80TY5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vps13bQ80TY5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.54□□□□□ -0.08
Vps13bQ80TY5 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.54□□□□□ -0.08
Vps13bQ80TY5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Vps13bQ80TY5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13bQ80TY5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vps13bQ80TY5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Vps13bQ80TY5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13bQ80TY5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps13bQ80TY5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.53□□□□□ -0.08
Vps13bQ80TY5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps13bQ80TY5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Vps13bQ80TY5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps13bQ80TY5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps13bQ80TY5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Vps13bQ80TY5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms