Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vma21Q78T54 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vma21Q78T54 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vma21Q78T54 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.1■□□□□ 0.65
Vma21Q78T54 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.1■□□□□ 0.65
Vma21Q78T54 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vma21Q78T54 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.09■□□□□ 0.65
Vma21Q78T54 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Vma21Q78T54 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vma21Q78T54 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vma21Q78T54 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vma21Q78T54 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vma21Q78T54 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vma21Q78T54 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Vma21Q78T54 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Vma21Q78T54 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vma21Q78T54 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vma21Q78T54 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Vma21Q78T54 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.05■□□□□ 0.64
Vma21Q78T54 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vma21Q78T54 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vma21Q78T54 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.05■□□□□ 0.64
Vma21Q78T54 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vma21Q78T54 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vma21Q78T54 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.05■□□□□ 0.64
Vma21Q78T54 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vma21Q78T54 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.04■□□□□ 0.64
Vma21Q78T54 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vma21Q78T54 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vma21Q78T54 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.02■□□□□ 0.64
Vma21Q78T54 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vma21Q78T54 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.01■□□□□ 0.63
Vma21Q78T54 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Vma21Q78T54 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vma21Q78T54 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vma21Q78T54 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19■□□□□ 0.63
Vma21Q78T54 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Vma21Q78T54 Gm24970-201ENSMUST00000175582 82 ntBASIC19■□□□□ 0.63
Vma21Q78T54 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19■□□□□ 0.63
Vma21Q78T54 Gm9397-201ENSMUST00000200125 605 ntBASIC19■□□□□ 0.63
Vma21Q78T54 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vma21Q78T54 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vma21Q78T54 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vma21Q78T54 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Vma21Q78T54 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.99■□□□□ 0.63
Vma21Q78T54 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.98■□□□□ 0.63
Vma21Q78T54 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vma21Q78T54 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vma21Q78T54 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vma21Q78T54 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vma21Q78T54 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vma21Q78T54 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Vma21Q78T54 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vma21Q78T54 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vma21Q78T54 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vma21Q78T54 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vma21Q78T54 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vma21Q78T54 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vma21Q78T54 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vma21Q78T54 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vma21Q78T54 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vma21Q78T54 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vma21Q78T54 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vma21Q78T54 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vma21Q78T54 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Vma21Q78T54 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vma21Q78T54 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vma21Q78T54 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.91■□□□□ 0.62
Vma21Q78T54 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.91■□□□□ 0.62
Vma21Q78T54 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vma21Q78T54 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vma21Q78T54 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vma21Q78T54 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vma21Q78T54 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vma21Q78T54 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.9■□□□□ 0.62
Vma21Q78T54 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vma21Q78T54 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Vma21Q78T54 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vma21Q78T54 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vma21Q78T54 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vma21Q78T54 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.89■□□□□ 0.61
Vma21Q78T54 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.89■□□□□ 0.61
Vma21Q78T54 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vma21Q78T54 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vma21Q78T54 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vma21Q78T54 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vma21Q78T54 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vma21Q78T54 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vma21Q78T54 Gm45855-201ENSMUST00000212546 880 ntBASIC18.86■□□□□ 0.61
Vma21Q78T54 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Vma21Q78T54 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vma21Q78T54 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vma21Q78T54 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.85■□□□□ 0.61
Vma21Q78T54 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 124 ms