Protein–RNA interactions for Protein: Q6PHN9

Rab35, Ras-related protein Rab-35, mousemouse

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab35Q6PHN9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Rab35Q6PHN9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab35Q6PHN9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rab35Q6PHN9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.69■□□□□ 0.9
Rab35Q6PHN9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.69■□□□□ 0.9
Rab35Q6PHN9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab35Q6PHN9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab35Q6PHN9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab35Q6PHN9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rab35Q6PHN9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab35Q6PHN9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rab35Q6PHN9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.67■□□□□ 0.9
Rab35Q6PHN9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab35Q6PHN9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rab35Q6PHN9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.66■□□□□ 0.9
Rab35Q6PHN9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.66■□□□□ 0.9
Rab35Q6PHN9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab35Q6PHN9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rab35Q6PHN9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Rab35Q6PHN9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rab35Q6PHN9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rab35Q6PHN9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab35Q6PHN9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab35Q6PHN9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab35Q6PHN9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab35Q6PHN9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab35Q6PHN9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab35Q6PHN9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 Gm7432-201ENSMUST00000210343 879 ntBASIC20.62■□□□□ 0.89
Rab35Q6PHN9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab35Q6PHN9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab35Q6PHN9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab35Q6PHN9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rab35Q6PHN9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab35Q6PHN9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab35Q6PHN9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.59■□□□□ 0.89
Rab35Q6PHN9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.59■□□□□ 0.89
Rab35Q6PHN9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab35Q6PHN9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rab35Q6PHN9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rab35Q6PHN9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rab35Q6PHN9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab35Q6PHN9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab35Q6PHN9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab35Q6PHN9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab35Q6PHN9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab35Q6PHN9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab35Q6PHN9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Rab35Q6PHN9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab35Q6PHN9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab35Q6PHN9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rab35Q6PHN9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rab35Q6PHN9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab35Q6PHN9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab35Q6PHN9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab35Q6PHN9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Rab35Q6PHN9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rab35Q6PHN9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab35Q6PHN9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab35Q6PHN9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab35Q6PHN9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
Rab35Q6PHN9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rab35Q6PHN9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rab35Q6PHN9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab35Q6PHN9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab35Q6PHN9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.51■□□□□ 0.87
Rab35Q6PHN9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab35Q6PHN9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.5■□□□□ 0.87
Rab35Q6PHN9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.49■□□□□ 0.87
Rab35Q6PHN9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.49■□□□□ 0.87
Rab35Q6PHN9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab35Q6PHN9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab35Q6PHN9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rab35Q6PHN9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab35Q6PHN9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab35Q6PHN9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rab35Q6PHN9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rab35Q6PHN9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rab35Q6PHN9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rab35Q6PHN9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab35Q6PHN9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab35Q6PHN9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab35Q6PHN9 Gm11599-201ENSMUST00000118720 878 ntBASIC20.45■□□□□ 0.86
Rab35Q6PHN9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.45■□□□□ 0.86
Rab35Q6PHN9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.45■□□□□ 0.86
Rab35Q6PHN9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rab35Q6PHN9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab35Q6PHN9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rab35Q6PHN9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab35Q6PHN9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
Rab35Q6PHN9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rab35Q6PHN9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.42■□□□□ 0.86
Rab35Q6PHN9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.42■□□□□ 0.86
Rab35Q6PHN9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.42■□□□□ 0.86
Rab35Q6PHN9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms