Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cachd1Q6PDJ1 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.23■■□□□ 1.47
Cachd1Q6PDJ1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cachd1Q6PDJ1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cachd1Q6PDJ1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cachd1Q6PDJ1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.22■■□□□ 1.47
Cachd1Q6PDJ1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cachd1Q6PDJ1 Particl-201ENSMUST00000205370 1560 ntBASIC24.21■■□□□ 1.47
Cachd1Q6PDJ1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.21■■□□□ 1.47
Cachd1Q6PDJ1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cachd1Q6PDJ1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Cachd1Q6PDJ1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cachd1Q6PDJ1 Gm10420-201ENSMUST00000121713 882 ntBASIC24.19■■□□□ 1.46
Cachd1Q6PDJ1 Gm14117-201ENSMUST00000122417 843 ntBASIC24.18■■□□□ 1.46
Cachd1Q6PDJ1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cachd1Q6PDJ1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cachd1Q6PDJ1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Cachd1Q6PDJ1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cachd1Q6PDJ1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cachd1Q6PDJ1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cachd1Q6PDJ1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.15■■□□□ 1.46
Cachd1Q6PDJ1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cachd1Q6PDJ1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cachd1Q6PDJ1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cachd1Q6PDJ1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Cachd1Q6PDJ1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cachd1Q6PDJ1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cachd1Q6PDJ1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Cachd1Q6PDJ1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Cachd1Q6PDJ1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cachd1Q6PDJ1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Cachd1Q6PDJ1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
Cachd1Q6PDJ1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cachd1Q6PDJ1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.12■■□□□ 1.45
Cachd1Q6PDJ1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cachd1Q6PDJ1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.11■■□□□ 1.45
Cachd1Q6PDJ1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cachd1Q6PDJ1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cachd1Q6PDJ1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Cachd1Q6PDJ1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cachd1Q6PDJ1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Cachd1Q6PDJ1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cachd1Q6PDJ1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Cachd1Q6PDJ1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cachd1Q6PDJ1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cachd1Q6PDJ1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.06■■□□□ 1.44
Cachd1Q6PDJ1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.06■■□□□ 1.44
Cachd1Q6PDJ1 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.06■■□□□ 1.44
Cachd1Q6PDJ1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.06■■□□□ 1.44
Cachd1Q6PDJ1 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.05■■□□□ 1.44
Cachd1Q6PDJ1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cachd1Q6PDJ1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.04■■□□□ 1.44
Cachd1Q6PDJ1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.04■■□□□ 1.44
Cachd1Q6PDJ1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cachd1Q6PDJ1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cachd1Q6PDJ1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cachd1Q6PDJ1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cachd1Q6PDJ1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cachd1Q6PDJ1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cachd1Q6PDJ1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cachd1Q6PDJ1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Cachd1Q6PDJ1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Cachd1Q6PDJ1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.99■■□□□ 1.43
Cachd1Q6PDJ1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Cachd1Q6PDJ1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cachd1Q6PDJ1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cachd1Q6PDJ1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cachd1Q6PDJ1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.98■■□□□ 1.43
Cachd1Q6PDJ1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cachd1Q6PDJ1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.98■■□□□ 1.43
Cachd1Q6PDJ1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cachd1Q6PDJ1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.97■■□□□ 1.43
Cachd1Q6PDJ1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cachd1Q6PDJ1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cachd1Q6PDJ1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cachd1Q6PDJ1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.96■■□□□ 1.43
Cachd1Q6PDJ1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cachd1Q6PDJ1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.96■■□□□ 1.43
Cachd1Q6PDJ1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cachd1Q6PDJ1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Cachd1Q6PDJ1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cachd1Q6PDJ1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.95■■□□□ 1.42
Cachd1Q6PDJ1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.94■■□□□ 1.42
Cachd1Q6PDJ1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cachd1Q6PDJ1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cachd1Q6PDJ1 Mir3960-201ENSMUST00000198213 73 ntBASIC23.93■■□□□ 1.42
Cachd1Q6PDJ1 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.93■■□□□ 1.42
Cachd1Q6PDJ1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cachd1Q6PDJ1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.92■■□□□ 1.42
Cachd1Q6PDJ1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cachd1Q6PDJ1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cachd1Q6PDJ1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.9■■□□□ 1.42
Cachd1Q6PDJ1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cachd1Q6PDJ1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Cachd1Q6PDJ1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Cachd1Q6PDJ1 Gm13238-201ENSMUST00000117655 780 ntBASIC23.89■■□□□ 1.41
Cachd1Q6PDJ1 Gm45444-201ENSMUST00000211394 898 ntBASIC23.89■■□□□ 1.41
Cachd1Q6PDJ1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Cachd1Q6PDJ1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cachd1Q6PDJ1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms