Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcd3Q6P9Z1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.44■■□□□ 1.02
Smarcd3Q6P9Z1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.43■■□□□ 1.02
Smarcd3Q6P9Z1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.43■■□□□ 1.02
Smarcd3Q6P9Z1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Smarcd3Q6P9Z1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcd3Q6P9Z1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smarcd3Q6P9Z1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.42■■□□□ 1.02
Smarcd3Q6P9Z1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Smarcd3Q6P9Z1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.41■■□□□ 1.02
Smarcd3Q6P9Z1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcd3Q6P9Z1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Smarcd3Q6P9Z1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.39■■□□□ 1.01
Smarcd3Q6P9Z1 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.39■■□□□ 1.01
Smarcd3Q6P9Z1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcd3Q6P9Z1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcd3Q6P9Z1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcd3Q6P9Z1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcd3Q6P9Z1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcd3Q6P9Z1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcd3Q6P9Z1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.36■■□□□ 1.01
Smarcd3Q6P9Z1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smarcd3Q6P9Z1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcd3Q6P9Z1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcd3Q6P9Z1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.35■■□□□ 1.01
Smarcd3Q6P9Z1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcd3Q6P9Z1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Smarcd3Q6P9Z1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smarcd3Q6P9Z1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smarcd3Q6P9Z1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smarcd3Q6P9Z1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.33■■□□□ 1.01
Smarcd3Q6P9Z1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.33■■□□□ 1
Smarcd3Q6P9Z1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcd3Q6P9Z1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Smarcd3Q6P9Z1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcd3Q6P9Z1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcd3Q6P9Z1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcd3Q6P9Z1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcd3Q6P9Z1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smarcd3Q6P9Z1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd3Q6P9Z1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarcd3Q6P9Z1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarcd3Q6P9Z1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcd3Q6P9Z1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Smarcd3Q6P9Z1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcd3Q6P9Z1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcd3Q6P9Z1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Smarcd3Q6P9Z1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcd3Q6P9Z1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcd3Q6P9Z1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.28■■□□□ 1
Smarcd3Q6P9Z1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarcd3Q6P9Z1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarcd3Q6P9Z1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcd3Q6P9Z1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcd3Q6P9Z1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcd3Q6P9Z1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcd3Q6P9Z1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smarcd3Q6P9Z1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcd3Q6P9Z1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Gm45855-201ENSMUST00000212546 880 ntBASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.25■□□□□ 0.99
Smarcd3Q6P9Z1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Smarcd3Q6P9Z1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd3Q6P9Z1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Smarcd3Q6P9Z1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcd3Q6P9Z1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.24■□□□□ 0.99
Smarcd3Q6P9Z1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd3Q6P9Z1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd3Q6P9Z1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcd3Q6P9Z1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd3Q6P9Z1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd3Q6P9Z1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcd3Q6P9Z1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarcd3Q6P9Z1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Smarcd3Q6P9Z1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.22■□□□□ 0.99
Smarcd3Q6P9Z1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcd3Q6P9Z1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd3Q6P9Z1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd3Q6P9Z1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.21■□□□□ 0.99
Smarcd3Q6P9Z1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcd3Q6P9Z1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smarcd3Q6P9Z1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd3Q6P9Z1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcd3Q6P9Z1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd3Q6P9Z1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd3Q6P9Z1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcd3Q6P9Z1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms