Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Runx1t1Q61909 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Runx1t1Q61909 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Runx1t1Q61909 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.29■■□□□ 1.16
Runx1t1Q61909 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Runx1t1Q61909 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Runx1t1Q61909 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Runx1t1Q61909 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Runx1t1Q61909 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Runx1t1Q61909 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Runx1t1Q61909 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Runx1t1Q61909 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Runx1t1Q61909 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Runx1t1Q61909 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Runx1t1Q61909 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Runx1t1Q61909 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Runx1t1Q61909 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Runx1t1Q61909 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Runx1t1Q61909 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.25■■□□□ 1.15
Runx1t1Q61909 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Runx1t1Q61909 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Runx1t1Q61909 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Runx1t1Q61909 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Runx1t1Q61909 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Runx1t1Q61909 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Runx1t1Q61909 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Runx1t1Q61909 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Runx1t1Q61909 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Runx1t1Q61909 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Runx1t1Q61909 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Runx1t1Q61909 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Runx1t1Q61909 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
Runx1t1Q61909 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Runx1t1Q61909 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Runx1t1Q61909 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Runx1t1Q61909 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Runx1t1Q61909 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Runx1t1Q61909 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Runx1t1Q61909 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Runx1t1Q61909 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Runx1t1Q61909 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Runx1t1Q61909 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Runx1t1Q61909 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Runx1t1Q61909 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Runx1t1Q61909 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Runx1t1Q61909 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Runx1t1Q61909 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Runx1t1Q61909 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Runx1t1Q61909 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Runx1t1Q61909 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Runx1t1Q61909 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Runx1t1Q61909 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Runx1t1Q61909 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Runx1t1Q61909 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Runx1t1Q61909 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Runx1t1Q61909 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Runx1t1Q61909 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.13■■□□□ 1.13
Runx1t1Q61909 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Runx1t1Q61909 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Runx1t1Q61909 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Runx1t1Q61909 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Runx1t1Q61909 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Runx1t1Q61909 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Runx1t1Q61909 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.11■■□□□ 1.13
Runx1t1Q61909 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Runx1t1Q61909 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
Runx1t1Q61909 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Runx1t1Q61909 Gm30023-201ENSMUST00000197970 889 ntBASIC22.1■■□□□ 1.13
Runx1t1Q61909 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Runx1t1Q61909 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Runx1t1Q61909 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
Runx1t1Q61909 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Runx1t1Q61909 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.09■■□□□ 1.13
Runx1t1Q61909 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
Runx1t1Q61909 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Runx1t1Q61909 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Runx1t1Q61909 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.08■■□□□ 1.13
Runx1t1Q61909 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Runx1t1Q61909 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Runx1t1Q61909 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Runx1t1Q61909 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Runx1t1Q61909 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Runx1t1Q61909 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Runx1t1Q61909 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Runx1t1Q61909 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Runx1t1Q61909 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Runx1t1Q61909 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Runx1t1Q61909 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.04■■□□□ 1.12
Runx1t1Q61909 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Runx1t1Q61909 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Runx1t1Q61909 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.04■■□□□ 1.12
Runx1t1Q61909 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Runx1t1Q61909 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Runx1t1Q61909 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms