Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Cd47Q61735 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd47Q61735 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Cd47Q61735 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd47Q61735 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Cd47Q61735 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd47Q61735 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cd47Q61735 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd47Q61735 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.26■□□□□ 0.99
Cd47Q61735 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd47Q61735 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cd47Q61735 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cd47Q61735 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd47Q61735 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Cd47Q61735 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cd47Q61735 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd47Q61735 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd47Q61735 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Cd47Q61735 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd47Q61735 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cd47Q61735 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd47Q61735 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cd47Q61735 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd47Q61735 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd47Q61735 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Cd47Q61735 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd47Q61735 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd47Q61735 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cd47Q61735 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cd47Q61735 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd47Q61735 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cd47Q61735 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd47Q61735 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cd47Q61735 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd47Q61735 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd47Q61735 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cd47Q61735 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd47Q61735 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cd47Q61735 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.17■□□□□ 0.98
Cd47Q61735 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cd47Q61735 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cd47Q61735 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd47Q61735 Gm30023-201ENSMUST00000197970 889 ntBASIC21.16■□□□□ 0.98
Cd47Q61735 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd47Q61735 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd47Q61735 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd47Q61735 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cd47Q61735 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.15■□□□□ 0.98
Cd47Q61735 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cd47Q61735 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.14■□□□□ 0.97
Cd47Q61735 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.14■□□□□ 0.97
Cd47Q61735 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd47Q61735 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cd47Q61735 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd47Q61735 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd47Q61735 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd47Q61735 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd47Q61735 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd47Q61735 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cd47Q61735 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd47Q61735 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cd47Q61735 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cd47Q61735 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cd47Q61735 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd47Q61735 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd47Q61735 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.1■□□□□ 0.97
Cd47Q61735 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd47Q61735 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cd47Q61735 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.1■□□□□ 0.97
Cd47Q61735 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd47Q61735 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.1■□□□□ 0.97
Cd47Q61735 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cd47Q61735 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cd47Q61735 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.09■□□□□ 0.97
Cd47Q61735 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cd47Q61735 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cd47Q61735 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cd47Q61735 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cd47Q61735 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cd47Q61735 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd47Q61735 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cd47Q61735 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd47Q61735 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cd47Q61735 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.06■□□□□ 0.96
Cd47Q61735 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd47Q61735 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cd47Q61735 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd47Q61735 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd47Q61735 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd47Q61735 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd47Q61735 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd47Q61735 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.04■□□□□ 0.96
Cd47Q61735 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cd47Q61735 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cd47Q61735 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cd47Q61735 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd47Q61735 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cd47Q61735 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cd47Q61735 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd47Q61735 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms