Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Traf4Q61382 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Traf4Q61382 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf4Q61382 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf4Q61382 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Traf4Q61382 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Traf4Q61382 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.6■□□□□ 0.89
Traf4Q61382 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf4Q61382 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Traf4Q61382 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Traf4Q61382 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Traf4Q61382 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.59■□□□□ 0.89
Traf4Q61382 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Traf4Q61382 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Traf4Q61382 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Traf4Q61382 Gm11599-201ENSMUST00000118720 878 ntBASIC20.57■□□□□ 0.88
Traf4Q61382 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.57■□□□□ 0.88
Traf4Q61382 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf4Q61382 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Traf4Q61382 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf4Q61382 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.56■□□□□ 0.88
Traf4Q61382 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.56■□□□□ 0.88
Traf4Q61382 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.56■□□□□ 0.88
Traf4Q61382 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf4Q61382 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Traf4Q61382 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Traf4Q61382 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Traf4Q61382 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.55■□□□□ 0.88
Traf4Q61382 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Traf4Q61382 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Traf4Q61382 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.54■□□□□ 0.88
Traf4Q61382 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Traf4Q61382 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Traf4Q61382 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Traf4Q61382 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Traf4Q61382 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Traf4Q61382 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Traf4Q61382 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Traf4Q61382 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Traf4Q61382 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Traf4Q61382 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.51■□□□□ 0.87
Traf4Q61382 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Traf4Q61382 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Traf4Q61382 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Traf4Q61382 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Traf4Q61382 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
Traf4Q61382 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf4Q61382 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf4Q61382 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Traf4Q61382 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Traf4Q61382 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Traf4Q61382 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf4Q61382 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Traf4Q61382 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf4Q61382 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Traf4Q61382 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Traf4Q61382 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Traf4Q61382 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Traf4Q61382 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.46■□□□□ 0.87
Traf4Q61382 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.45■□□□□ 0.86
Traf4Q61382 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.45■□□□□ 0.86
Traf4Q61382 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Traf4Q61382 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Traf4Q61382 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Traf4Q61382 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Traf4Q61382 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Traf4Q61382 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Traf4Q61382 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Traf4Q61382 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Traf4Q61382 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Traf4Q61382 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Traf4Q61382 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Traf4Q61382 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Traf4Q61382 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Traf4Q61382 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.42■□□□□ 0.86
Traf4Q61382 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Traf4Q61382 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Traf4Q61382 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.42■□□□□ 0.86
Traf4Q61382 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Traf4Q61382 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Traf4Q61382 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Traf4Q61382 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Traf4Q61382 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Traf4Q61382 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Traf4Q61382 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Traf4Q61382 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Traf4Q61382 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Traf4Q61382 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Traf4Q61382 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Traf4Q61382 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Traf4Q61382 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Traf4Q61382 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Traf4Q61382 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.38■□□□□ 0.85
Traf4Q61382 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Traf4Q61382 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Traf4Q61382 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Traf4Q61382 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.37■□□□□ 0.85
Traf4Q61382 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Traf4Q61382 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Traf4Q61382 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms