Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Foxf1Q61080 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Foxf1Q61080 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.74■□□□□ 0.75
Foxf1Q61080 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Foxf1Q61080 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxf1Q61080 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxf1Q61080 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxf1Q61080 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Foxf1Q61080 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxf1Q61080 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxf1Q61080 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxf1Q61080 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxf1Q61080 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxf1Q61080 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.71■□□□□ 0.75
Foxf1Q61080 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxf1Q61080 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxf1Q61080 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxf1Q61080 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.71■□□□□ 0.75
Foxf1Q61080 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxf1Q61080 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxf1Q61080 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxf1Q61080 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxf1Q61080 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxf1Q61080 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Foxf1Q61080 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Foxf1Q61080 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Foxf1Q61080 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxf1Q61080 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxf1Q61080 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxf1Q61080 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Foxf1Q61080 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxf1Q61080 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Foxf1Q61080 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Foxf1Q61080 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxf1Q61080 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.67■□□□□ 0.74
Foxf1Q61080 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxf1Q61080 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Foxf1Q61080 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Foxf1Q61080 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxf1Q61080 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxf1Q61080 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxf1Q61080 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Foxf1Q61080 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxf1Q61080 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Foxf1Q61080 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxf1Q61080 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxf1Q61080 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxf1Q61080 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxf1Q61080 Gm30023-201ENSMUST00000197970 889 ntBASIC19.64■□□□□ 0.73
Foxf1Q61080 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxf1Q61080 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxf1Q61080 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.63■□□□□ 0.73
Foxf1Q61080 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.63■□□□□ 0.73
Foxf1Q61080 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxf1Q61080 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Foxf1Q61080 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Foxf1Q61080 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxf1Q61080 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Foxf1Q61080 Nkain2-201ENSMUST00000092602 558 ntBASIC19.62■□□□□ 0.73
Foxf1Q61080 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Foxf1Q61080 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxf1Q61080 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxf1Q61080 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxf1Q61080 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.6■□□□□ 0.73
Foxf1Q61080 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxf1Q61080 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxf1Q61080 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxf1Q61080 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxf1Q61080 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Foxf1Q61080 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxf1Q61080 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Foxf1Q61080 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Foxf1Q61080 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
Foxf1Q61080 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxf1Q61080 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxf1Q61080 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.57■□□□□ 0.72
Foxf1Q61080 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxf1Q61080 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxf1Q61080 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Foxf1Q61080 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Foxf1Q61080 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxf1Q61080 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Foxf1Q61080 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.56■□□□□ 0.72
Foxf1Q61080 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.56■□□□□ 0.72
Foxf1Q61080 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Foxf1Q61080 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Foxf1Q61080 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxf1Q61080 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Foxf1Q61080 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxf1Q61080 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Foxf1Q61080 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Foxf1Q61080 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxf1Q61080 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Foxf1Q61080 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.53■□□□□ 0.72
Foxf1Q61080 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Foxf1Q61080 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxf1Q61080 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Foxf1Q61080 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Foxf1Q61080 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Foxf1Q61080 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms