Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdv4Q5R1A3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdv4Q5R1A3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdv4Q5R1A3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.47■□□□□ 0.71
Trdv4Q5R1A3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Trdv4Q5R1A3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trdv4Q5R1A3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdv4Q5R1A3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdv4Q5R1A3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trdv4Q5R1A3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdv4Q5R1A3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.45■□□□□ 0.7
Trdv4Q5R1A3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trdv4Q5R1A3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trdv4Q5R1A3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.44■□□□□ 0.7
Trdv4Q5R1A3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trdv4Q5R1A3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdv4Q5R1A3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trdv4Q5R1A3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.42■□□□□ 0.7
Trdv4Q5R1A3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdv4Q5R1A3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trdv4Q5R1A3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trdv4Q5R1A3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.41■□□□□ 0.7
Trdv4Q5R1A3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trdv4Q5R1A3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trdv4Q5R1A3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trdv4Q5R1A3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trdv4Q5R1A3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.39■□□□□ 0.7
Trdv4Q5R1A3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trdv4Q5R1A3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trdv4Q5R1A3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trdv4Q5R1A3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdv4Q5R1A3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trdv4Q5R1A3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
Trdv4Q5R1A3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trdv4Q5R1A3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdv4Q5R1A3 Nkain2-201ENSMUST00000092602 558 ntBASIC19.36■□□□□ 0.69
Trdv4Q5R1A3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trdv4Q5R1A3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trdv4Q5R1A3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trdv4Q5R1A3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trdv4Q5R1A3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trdv4Q5R1A3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trdv4Q5R1A3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdv4Q5R1A3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trdv4Q5R1A3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trdv4Q5R1A3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdv4Q5R1A3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trdv4Q5R1A3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trdv4Q5R1A3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trdv4Q5R1A3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trdv4Q5R1A3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.31■□□□□ 0.68
Trdv4Q5R1A3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trdv4Q5R1A3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trdv4Q5R1A3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trdv4Q5R1A3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trdv4Q5R1A3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trdv4Q5R1A3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.3■□□□□ 0.68
Trdv4Q5R1A3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trdv4Q5R1A3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trdv4Q5R1A3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.27■□□□□ 0.68
Trdv4Q5R1A3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trdv4Q5R1A3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trdv4Q5R1A3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.26■□□□□ 0.67
Trdv4Q5R1A3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.25■□□□□ 0.67
Trdv4Q5R1A3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trdv4Q5R1A3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdv4Q5R1A3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trdv4Q5R1A3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trdv4Q5R1A3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdv4Q5R1A3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trdv4Q5R1A3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trdv4Q5R1A3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.23■□□□□ 0.67
Trdv4Q5R1A3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdv4Q5R1A3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trdv4Q5R1A3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms