Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdk1Q3UH53 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sdk1Q3UH53 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdk1Q3UH53 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sdk1Q3UH53 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sdk1Q3UH53 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sdk1Q3UH53 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sdk1Q3UH53 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.45■□□□□ 0.86
Sdk1Q3UH53 Gm14523-201ENSMUST00000117260 558 ntBASIC20.45■□□□□ 0.86
Sdk1Q3UH53 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sdk1Q3UH53 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sdk1Q3UH53 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sdk1Q3UH53 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Sdk1Q3UH53 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.43■□□□□ 0.86
Sdk1Q3UH53 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.43■□□□□ 0.86
Sdk1Q3UH53 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sdk1Q3UH53 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.42■□□□□ 0.86
Sdk1Q3UH53 Mir3960-201ENSMUST00000198213 73 ntBASIC20.42■□□□□ 0.86
Sdk1Q3UH53 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sdk1Q3UH53 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Sdk1Q3UH53 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sdk1Q3UH53 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdk1Q3UH53 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sdk1Q3UH53 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sdk1Q3UH53 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.4■□□□□ 0.86
Sdk1Q3UH53 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdk1Q3UH53 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sdk1Q3UH53 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdk1Q3UH53 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sdk1Q3UH53 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdk1Q3UH53 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.39■□□□□ 0.85
Sdk1Q3UH53 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdk1Q3UH53 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sdk1Q3UH53 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Gm5921-201ENSMUST00000075898 882 ntBASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sdk1Q3UH53 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sdk1Q3UH53 Gm10420-201ENSMUST00000121713 882 ntBASIC20.36■□□□□ 0.85
Sdk1Q3UH53 Gm15546-201ENSMUST00000122095 826 ntBASIC20.36■□□□□ 0.85
Sdk1Q3UH53 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sdk1Q3UH53 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdk1Q3UH53 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdk1Q3UH53 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sdk1Q3UH53 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sdk1Q3UH53 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.33■□□□□ 0.85
Sdk1Q3UH53 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sdk1Q3UH53 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdk1Q3UH53 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sdk1Q3UH53 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sdk1Q3UH53 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.3■□□□□ 0.84
Sdk1Q3UH53 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sdk1Q3UH53 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sdk1Q3UH53 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sdk1Q3UH53 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.29■□□□□ 0.84
Sdk1Q3UH53 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.28■□□□□ 0.84
Sdk1Q3UH53 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.28■□□□□ 0.84
Sdk1Q3UH53 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdk1Q3UH53 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sdk1Q3UH53 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.27■□□□□ 0.84
Sdk1Q3UH53 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdk1Q3UH53 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.26■□□□□ 0.83
Sdk1Q3UH53 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdk1Q3UH53 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdk1Q3UH53 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdk1Q3UH53 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdk1Q3UH53 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sdk1Q3UH53 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdk1Q3UH53 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.24■□□□□ 0.83
Sdk1Q3UH53 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.24■□□□□ 0.83
Sdk1Q3UH53 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.23■□□□□ 0.83
Sdk1Q3UH53 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
Sdk1Q3UH53 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sdk1Q3UH53 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sdk1Q3UH53 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.23■□□□□ 0.83
Sdk1Q3UH53 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sdk1Q3UH53 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sdk1Q3UH53 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.22■□□□□ 0.83
Sdk1Q3UH53 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.22■□□□□ 0.83
Sdk1Q3UH53 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.21■□□□□ 0.83
Sdk1Q3UH53 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdk1Q3UH53 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sdk1Q3UH53 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.21■□□□□ 0.83
Sdk1Q3UH53 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sdk1Q3UH53 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdk1Q3UH53 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdk1Q3UH53 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdk1Q3UH53 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sdk1Q3UH53 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Sdk1Q3UH53 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Sdk1Q3UH53 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.18■□□□□ 0.82
Sdk1Q3UH53 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sdk1Q3UH53 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sdk1Q3UH53 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sdk1Q3UH53 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms