Protein–RNA interactions for Protein: Q3TQB2

Foxred1, FAD-dependent oxidoreductase domain-containing protein 1, mousemouse

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxred1Q3TQB2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Foxred1Q3TQB2 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.44■■□□□ 1.18
Foxred1Q3TQB2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
Foxred1Q3TQB2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Foxred1Q3TQB2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.43■■□□□ 1.18
Foxred1Q3TQB2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Foxred1Q3TQB2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.42■■□□□ 1.18
Foxred1Q3TQB2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Foxred1Q3TQB2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Foxred1Q3TQB2 Gm11599-201ENSMUST00000118720 878 ntBASIC22.4■■□□□ 1.18
Foxred1Q3TQB2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.4■■□□□ 1.18
Foxred1Q3TQB2 Particl-201ENSMUST00000205370 1560 ntBASIC22.39■■□□□ 1.18
Foxred1Q3TQB2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Foxred1Q3TQB2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.36■■□□□ 1.17
Foxred1Q3TQB2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Foxred1Q3TQB2 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.35■■□□□ 1.17
Foxred1Q3TQB2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Foxred1Q3TQB2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Foxred1Q3TQB2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Foxred1Q3TQB2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Foxred1Q3TQB2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Foxred1Q3TQB2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxred1Q3TQB2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Foxred1Q3TQB2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Foxred1Q3TQB2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.3■■□□□ 1.16
Foxred1Q3TQB2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Foxred1Q3TQB2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxred1Q3TQB2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Foxred1Q3TQB2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Foxred1Q3TQB2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Foxred1Q3TQB2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxred1Q3TQB2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Foxred1Q3TQB2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.25■■□□□ 1.15
Foxred1Q3TQB2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Foxred1Q3TQB2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Foxred1Q3TQB2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.23■■□□□ 1.15
Foxred1Q3TQB2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Foxred1Q3TQB2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxred1Q3TQB2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Foxred1Q3TQB2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Foxred1Q3TQB2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxred1Q3TQB2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Foxred1Q3TQB2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxred1Q3TQB2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxred1Q3TQB2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.16■■□□□ 1.14
Foxred1Q3TQB2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Gm37136-201ENSMUST00000194368 194 ntBASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxred1Q3TQB2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Foxred1Q3TQB2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Foxred1Q3TQB2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Foxred1Q3TQB2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Foxred1Q3TQB2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxred1Q3TQB2 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.13■■□□□ 1.13
Foxred1Q3TQB2 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.13■■□□□ 1.13
Foxred1Q3TQB2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxred1Q3TQB2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Foxred1Q3TQB2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxred1Q3TQB2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Foxred1Q3TQB2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxred1Q3TQB2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Foxred1Q3TQB2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Foxred1Q3TQB2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxred1Q3TQB2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.08■■□□□ 1.13
Foxred1Q3TQB2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxred1Q3TQB2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxred1Q3TQB2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Foxred1Q3TQB2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms