Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 ELP4YPL101W 1371 nt8.26□□□□□ -1.09
DDC1Q08949 tL(UAA)B1tL(UAA)B1 84 nt8.26□□□□□ -1.09
DDC1Q08949 tL(UAA)B2tL(UAA)B2 84 nt8.26□□□□□ -1.09
DDC1Q08949 tL(UAA)DtL(UAA)D 84 nt8.26□□□□□ -1.09
DDC1Q08949 SUP51tL(UAA)J 84 nt8.26□□□□□ -1.09
DDC1Q08949 tL(UAA)KtL(UAA)K 84 nt8.26□□□□□ -1.09
DDC1Q08949 tL(UAA)LtL(UAA)L 84 nt8.26□□□□□ -1.09
DDC1Q08949 tL(UAA)NtL(UAA)N 84 nt8.26□□□□□ -1.09
DDC1Q08949 TAD2YJL035C 753 nt8.26□□□□□ -1.09
DDC1Q08949 BUB2YMR055C 921 nt8.26□□□□□ -1.09
DDC1Q08949 YMC2YBR104W 990 nt8.26□□□□□ -1.09
DDC1Q08949 YPR084WYPR084W 1371 nt8.25□□□□□ -1.09
DDC1Q08949 MRS4YKR052C 915 nt8.25□□□□□ -1.09
DDC1Q08949 YBR056WYBR056W 1506 nt8.24□□□□□ -1.09
DDC1Q08949 RHO1YPR165W 630 nt8.23□□□□□ -1.09
DDC1Q08949 ATP2YJR121W 1536 nt8.23□□□□□ -1.09
DDC1Q08949 PSD1YNL169C 1503 nt8.22□□□□□ -1.09
DDC1Q08949 TPN1YGL186C 1740 nt8.21□□□□□ -1.09
DDC1Q08949 EDC2YER035W 438 nt8.21□□□□□ -1.1
DDC1Q08949 YJL009WYJL009W 327 nt8.21□□□□□ -1.1
DDC1Q08949 YPT31YER031C 672 nt8.2□□□□□ -1.1
DDC1Q08949 PUP3YER094C 618 nt8.19□□□□□ -1.1
DDC1Q08949 ADE1YAR015W 921 nt8.19□□□□□ -1.1
DDC1Q08949 YMR206WYMR206W 942 nt8.19□□□□□ -1.1
DDC1Q08949 AAT1YKL106W 1356 nt8.19□□□□□ -1.1
DDC1Q08949 TDH1YJL052W 999 nt8.18□□□□□ -1.1
DDC1Q08949 HXK1YFR053C 1458 nt8.18□□□□□ -1.1
DDC1Q08949 SHC1YER096W 1539 nt8.18□□□□□ -1.1
DDC1Q08949 snR86snR86 1004 nt8.17□□□□□ -1.1
DDC1Q08949 CYT1YOR065W 930 nt8.17□□□□□ -1.1
DDC1Q08949 YRF1-3YGR296W 5580 nt8.16□□□□□ -1.1
DDC1Q08949 THI73YLR004C 1572 nt8.16□□□□□ -1.1
DDC1Q08949 YRF1-6YNL339C 5580 nt8.16□□□□□ -1.1
DDC1Q08949 YRF1-7YPL283C 5580 nt8.16□□□□□ -1.1
DDC1Q08949 YOR268CYOR268C 399 nt8.15□□□□□ -1.1
DDC1Q08949 MTO1YGL236C 2010 nt8.15□□□□□ -1.11
DDC1Q08949 MEP1YGR121C 1479 nt8.14□□□□□ -1.11
DDC1Q08949 KAE1YKR038C 1161 nt8.14□□□□□ -1.11
DDC1Q08949 NUP53YMR153W 1428 nt8.13□□□□□ -1.11
DDC1Q08949 TOS1YBR162C 1368 nt8.13□□□□□ -1.11
DDC1Q08949 YIL168WYIL168W 384 nt8.13□□□□□ -1.11
DDC1Q08949 NSG2YNL156C 900 nt8.13□□□□□ -1.11
DDC1Q08949 TOM71YHR117W 1920 nt8.13□□□□□ -1.11
DDC1Q08949 TIM50YPL063W 1431 nt8.12□□□□□ -1.11
DDC1Q08949 LRO1YNR008W 1986 nt8.11□□□□□ -1.11
DDC1Q08949 EHT1YBR177C 1356 nt8.11□□□□□ -1.11
DDC1Q08949 YLR072WYLR072W 2082 nt8.11□□□□□ -1.11
DDC1Q08949 YJL043WYJL043W 774 nt8.11□□□□□ -1.11
DDC1Q08949 PMU1YKL128C 888 nt8.11□□□□□ -1.11
DDC1Q08949 FUS3YBL016W 1062 nt8.11□□□□□ -1.11
DDC1Q08949 JHD1YER051W 1479 nt8.11□□□□□ -1.11
DDC1Q08949 YHL008CYHL008C 1884 nt8.1□□□□□ -1.11
DDC1Q08949 ALD5YER073W 1563 nt8.1□□□□□ -1.11
DDC1Q08949 HXT8YJL214W 1710 nt8.09□□□□□ -1.11
DDC1Q08949 FET5YFL041W 1869 nt8.09□□□□□ -1.12
DDC1Q08949 PRE10YOR362C 867 nt8.08□□□□□ -1.12
DDC1Q08949 YHL030W-AYHL030W-A 462 nt8.07□□□□□ -1.12
DDC1Q08949 RCF1YML030W 480 nt8.07□□□□□ -1.12
DDC1Q08949 THI6YPL214C 1623 nt8.07□□□□□ -1.12
DDC1Q08949 MCM5YLR274W 2328 nt8.06□□□□□ -1.12
DDC1Q08949 TRP2YER090W 1524 nt8.06□□□□□ -1.12
DDC1Q08949 MFG1YDL233W 1377 nt8.06□□□□□ -1.12
DDC1Q08949 PET494YNR045W 1470 nt8.06□□□□□ -1.12
DDC1Q08949 PSP2YML017W 1782 nt8.04□□□□□ -1.12
DDC1Q08949 HXT11YOL156W 1704 nt8.03□□□□□ -1.12
DDC1Q08949 DIP5YPL265W 1827 nt8.03□□□□□ -1.12
DDC1Q08949 BUD31YCR063W 474 nt8.03□□□□□ -1.12
DDC1Q08949 NBA1YOL070C 1506 nt8.03□□□□□ -1.12
DDC1Q08949 HIS3YOR202W 663 nt8.01□□□□□ -1.13
DDC1Q08949 HAC1YFL031W 717 nt8□□□□□ -1.13
DDC1Q08949 ABP1YCR088W 1779 nt7.99□□□□□ -1.13
DDC1Q08949 YIL177CYIL177C 5277 nt7.99□□□□□ -1.13
DDC1Q08949 YDR476CYDR476C 675 nt7.99□□□□□ -1.13
DDC1Q08949 RRT6YGL146C 936 nt7.99□□□□□ -1.13
DDC1Q08949 YLR173WYLR173W 1827 nt7.99□□□□□ -1.13
DDC1Q08949 INO1YJL153C 1602 nt7.98□□□□□ -1.13
DDC1Q08949 BAP3YDR046C 1815 nt7.98□□□□□ -1.13
DDC1Q08949 WSC3YOL105C 1671 nt7.98□□□□□ -1.13
DDC1Q08949 NDE2YDL085W 1638 nt7.97□□□□□ -1.13
DDC1Q08949 APT1YML022W 564 nt7.97□□□□□ -1.13
DDC1Q08949 CPT1YNL130C 1182 nt7.97□□□□□ -1.13
DDC1Q08949 ARG7YMR062C 1326 nt7.97□□□□□ -1.13
DDC1Q08949 SPR1YOR190W 1338 nt7.97□□□□□ -1.13
DDC1Q08949 TDA4YJR116W 840 nt7.96□□□□□ -1.14
DDC1Q08949 LEA1YPL213W 717 nt7.96□□□□□ -1.14
DDC1Q08949 RTG2YGL252C 1767 nt7.96□□□□□ -1.14
DDC1Q08949 PNS1YOR161C 1620 nt7.96□□□□□ -1.14
DDC1Q08949 SRM1YGL097W 1449 nt7.95□□□□□ -1.14
DDC1Q08949 GLY1YEL046C 1164 nt7.94□□□□□ -1.14
DDC1Q08949 PRE5YMR314W 705 nt7.94□□□□□ -1.14
DDC1Q08949 ALG7YBR243C 1347 nt7.94□□□□□ -1.14
DDC1Q08949 ARO3YDR035W 1113 nt7.93□□□□□ -1.14
DDC1Q08949 WSC4YHL028W 1818 nt7.92□□□□□ -1.14
DDC1Q08949 YGR137WYGR137W 375 nt7.92□□□□□ -1.14
DDC1Q08949 TGL5YOR081C 2250 nt7.92□□□□□ -1.14
DDC1Q08949 MAS1YLR163C 1389 nt7.89□□□□□ -1.15
DDC1Q08949 HOG1YLR113W 1308 nt7.89□□□□□ -1.15
DDC1Q08949 YLR358CYLR358C 564 nt7.89□□□□□ -1.15
DDC1Q08949 MRN1YPL184C 1839 nt7.89□□□□□ -1.15
DDC1Q08949 TIF3YPR163C 1311 nt7.88□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms