Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Npas1P97459 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npas1P97459 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Npas1P97459 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Npas1P97459 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npas1P97459 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.56■□□□□ 0.72
Npas1P97459 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Npas1P97459 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npas1P97459 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Npas1P97459 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.55■□□□□ 0.72
Npas1P97459 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Npas1P97459 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.55■□□□□ 0.72
Npas1P97459 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Npas1P97459 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Npas1P97459 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Npas1P97459 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.53■□□□□ 0.72
Npas1P97459 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Npas1P97459 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Npas1P97459 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Npas1P97459 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Npas1P97459 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Npas1P97459 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Npas1P97459 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Npas1P97459 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npas1P97459 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npas1P97459 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npas1P97459 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Npas1P97459 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Npas1P97459 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.5■□□□□ 0.71
Npas1P97459 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Npas1P97459 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Npas1P97459 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Npas1P97459 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npas1P97459 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Npas1P97459 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npas1P97459 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npas1P97459 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Npas1P97459 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Npas1P97459 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Npas1P97459 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npas1P97459 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Npas1P97459 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npas1P97459 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npas1P97459 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Npas1P97459 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Npas1P97459 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npas1P97459 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Npas1P97459 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Npas1P97459 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Npas1P97459 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Npas1P97459 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Npas1P97459 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Npas1P97459 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npas1P97459 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npas1P97459 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Npas1P97459 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npas1P97459 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Npas1P97459 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Npas1P97459 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Npas1P97459 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.44■□□□□ 0.7
Npas1P97459 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Npas1P97459 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Npas1P97459 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npas1P97459 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Npas1P97459 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Npas1P97459 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Npas1P97459 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Npas1P97459 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Npas1P97459 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.42■□□□□ 0.7
Npas1P97459 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.42■□□□□ 0.7
Npas1P97459 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Npas1P97459 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npas1P97459 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Npas1P97459 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Npas1P97459 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npas1P97459 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
Npas1P97459 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npas1P97459 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Npas1P97459 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Npas1P97459 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npas1P97459 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npas1P97459 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.4■□□□□ 0.7
Npas1P97459 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Npas1P97459 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npas1P97459 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Npas1P97459 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Npas1P97459 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Npas1P97459 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Npas1P97459 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Npas1P97459 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Npas1P97459 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Npas1P97459 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Npas1P97459 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Npas1P97459 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms