Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim4P70271 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim4P70271 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.47■□□□□ 0.71
Pdlim4P70271 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim4P70271 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pdlim4P70271 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim4P70271 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pdlim4P70271 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pdlim4P70271 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdlim4P70271 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.45■□□□□ 0.7
Pdlim4P70271 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim4P70271 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim4P70271 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdlim4P70271 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdlim4P70271 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.44■□□□□ 0.7
Pdlim4P70271 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.44■□□□□ 0.7
Pdlim4P70271 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim4P70271 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim4P70271 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdlim4P70271 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pdlim4P70271 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.42■□□□□ 0.7
Pdlim4P70271 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim4P70271 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdlim4P70271 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim4P70271 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdlim4P70271 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdlim4P70271 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdlim4P70271 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.4■□□□□ 0.7
Pdlim4P70271 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdlim4P70271 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Pdlim4P70271 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pdlim4P70271 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim4P70271 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim4P70271 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim4P70271 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim4P70271 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdlim4P70271 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.39■□□□□ 0.69
Pdlim4P70271 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdlim4P70271 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Pdlim4P70271 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Pdlim4P70271 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim4P70271 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pdlim4P70271 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim4P70271 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.36■□□□□ 0.69
Pdlim4P70271 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim4P70271 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim4P70271 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pdlim4P70271 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.35■□□□□ 0.69
Pdlim4P70271 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim4P70271 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim4P70271 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pdlim4P70271 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.34■□□□□ 0.69
Pdlim4P70271 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pdlim4P70271 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pdlim4P70271 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim4P70271 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim4P70271 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pdlim4P70271 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim4P70271 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pdlim4P70271 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim4P70271 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pdlim4P70271 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pdlim4P70271 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim4P70271 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim4P70271 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim4P70271 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pdlim4P70271 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim4P70271 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.3■□□□□ 0.68
Pdlim4P70271 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pdlim4P70271 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pdlim4P70271 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim4P70271 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pdlim4P70271 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.28■□□□□ 0.68
Pdlim4P70271 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim4P70271 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pdlim4P70271 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pdlim4P70271 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim4P70271 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.26■□□□□ 0.67
Pdlim4P70271 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pdlim4P70271 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim4P70271 Particl-201ENSMUST00000205370 1560 ntBASIC19.25■□□□□ 0.67
Pdlim4P70271 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim4P70271 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pdlim4P70271 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim4P70271 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim4P70271 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pdlim4P70271 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim4P70271 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim4P70271 Gm7432-201ENSMUST00000210343 879 ntBASIC19.22■□□□□ 0.67
Pdlim4P70271 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim4P70271 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.21■□□□□ 0.67
Pdlim4P70271 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.21■□□□□ 0.67
Pdlim4P70271 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim4P70271 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim4P70271 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim4P70271 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
Pdlim4P70271 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim4P70271 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdlim4P70271 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim4P70271 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms