Protein–RNA interactions for Protein: P63013

Prrx1, Paired mesoderm homeobox protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrx1P63013 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.35■□□□□ 0.69
Prrx1P63013 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prrx1P63013 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prrx1P63013 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Prrx1P63013 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prrx1P63013 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prrx1P63013 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prrx1P63013 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.32■□□□□ 0.68
Prrx1P63013 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrx1P63013 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrx1P63013 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prrx1P63013 Gm8503-201ENSMUST00000118131 455 ntBASIC19.31■□□□□ 0.68
Prrx1P63013 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrx1P63013 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Prrx1P63013 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prrx1P63013 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prrx1P63013 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.3■□□□□ 0.68
Prrx1P63013 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prrx1P63013 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prrx1P63013 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrx1P63013 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prrx1P63013 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.29■□□□□ 0.68
Prrx1P63013 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrx1P63013 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prrx1P63013 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.28■□□□□ 0.68
Prrx1P63013 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.28■□□□□ 0.68
Prrx1P63013 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prrx1P63013 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Prrx1P63013 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Prrx1P63013 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrx1P63013 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrx1P63013 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prrx1P63013 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prrx1P63013 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prrx1P63013 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrx1P63013 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.26■□□□□ 0.67
Prrx1P63013 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrx1P63013 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prrx1P63013 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrx1P63013 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prrx1P63013 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.25■□□□□ 0.67
Prrx1P63013 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prrx1P63013 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prrx1P63013 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
Prrx1P63013 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prrx1P63013 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrx1P63013 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrx1P63013 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrx1P63013 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrx1P63013 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrx1P63013 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prrx1P63013 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prrx1P63013 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.22■□□□□ 0.67
Prrx1P63013 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.22■□□□□ 0.67
Prrx1P63013 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.22■□□□□ 0.67
Prrx1P63013 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prrx1P63013 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prrx1P63013 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Prrx1P63013 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prrx1P63013 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prrx1P63013 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prrx1P63013 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prrx1P63013 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prrx1P63013 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.2■□□□□ 0.66
Prrx1P63013 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.2■□□□□ 0.66
Prrx1P63013 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prrx1P63013 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.2■□□□□ 0.66
Prrx1P63013 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.2■□□□□ 0.66
Prrx1P63013 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrx1P63013 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Prrx1P63013 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrx1P63013 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrx1P63013 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prrx1P63013 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.19■□□□□ 0.66
Prrx1P63013 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prrx1P63013 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prrx1P63013 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrx1P63013 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrx1P63013 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prrx1P63013 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prrx1P63013 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prrx1P63013 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prrx1P63013 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.16■□□□□ 0.66
Prrx1P63013 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prrx1P63013 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrx1P63013 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrx1P63013 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrx1P63013 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prrx1P63013 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prrx1P63013 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prrx1P63013 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prrx1P63013 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Prrx1P63013 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prrx1P63013 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prrx1P63013 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prrx1P63013 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prrx1P63013 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prrx1P63013 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prrx1P63013 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prrx1P63013 Particl-201ENSMUST00000205370 1560 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms