Protein–RNA interactions for Protein: P58406

Hrh3, Histamine H3 receptor, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hrh3P58406 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.59■■□□□ 1.05
Hrh3P58406 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Hrh3P58406 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hrh3P58406 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.58■■□□□ 1.05
Hrh3P58406 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hrh3P58406 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hrh3P58406 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hrh3P58406 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Hrh3P58406 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hrh3P58406 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hrh3P58406 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hrh3P58406 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Hrh3P58406 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hrh3P58406 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Hrh3P58406 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hrh3P58406 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hrh3P58406 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Hrh3P58406 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.54■■□□□ 1.04
Hrh3P58406 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hrh3P58406 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.53■■□□□ 1.04
Hrh3P58406 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hrh3P58406 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.52■■□□□ 1.04
Hrh3P58406 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hrh3P58406 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hrh3P58406 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.51■■□□□ 1.03
Hrh3P58406 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Hrh3P58406 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hrh3P58406 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hrh3P58406 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hrh3P58406 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hrh3P58406 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hrh3P58406 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hrh3P58406 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hrh3P58406 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Hrh3P58406 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.46■■□□□ 1.03
Hrh3P58406 Gm7432-201ENSMUST00000210343 879 ntBASIC21.46■■□□□ 1.03
Hrh3P58406 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hrh3P58406 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hrh3P58406 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Hrh3P58406 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Hrh3P58406 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.44■■□□□ 1.02
Hrh3P58406 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
Hrh3P58406 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
Hrh3P58406 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hrh3P58406 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hrh3P58406 Particl-201ENSMUST00000205370 1560 ntBASIC21.43■■□□□ 1.02
Hrh3P58406 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hrh3P58406 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Hrh3P58406 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.42■■□□□ 1.02
Hrh3P58406 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hrh3P58406 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Hrh3P58406 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hrh3P58406 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hrh3P58406 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.41■■□□□ 1.02
Hrh3P58406 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hrh3P58406 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hrh3P58406 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hrh3P58406 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hrh3P58406 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hrh3P58406 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hrh3P58406 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hrh3P58406 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.39■■□□□ 1.01
Hrh3P58406 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hrh3P58406 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.37■■□□□ 1.01
Hrh3P58406 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.37■■□□□ 1.01
Hrh3P58406 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hrh3P58406 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hrh3P58406 Gm11599-201ENSMUST00000118720 878 ntBASIC21.36■■□□□ 1.01
Hrh3P58406 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.36■■□□□ 1.01
Hrh3P58406 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Hrh3P58406 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hrh3P58406 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hrh3P58406 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hrh3P58406 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Hrh3P58406 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hrh3P58406 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hrh3P58406 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hrh3P58406 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.32■■□□□ 1
Hrh3P58406 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hrh3P58406 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Hrh3P58406 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hrh3P58406 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hrh3P58406 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Hrh3P58406 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Hrh3P58406 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hrh3P58406 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hrh3P58406 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hrh3P58406 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Hrh3P58406 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.28■■□□□ 1
Hrh3P58406 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.28■■□□□ 1
Hrh3P58406 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hrh3P58406 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hrh3P58406 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hrh3P58406 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms