Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hmga2P52927 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hmga2P52927 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Hmga2P52927 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmga2P52927 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hmga2P52927 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hmga2P52927 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.1■□□□□ 0.81
Hmga2P52927 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmga2P52927 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmga2P52927 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hmga2P52927 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmga2P52927 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.09■□□□□ 0.81
Hmga2P52927 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hmga2P52927 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hmga2P52927 Gm16148-201ENSMUST00000119653 893 ntBASIC20.08■□□□□ 0.81
Hmga2P52927 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmga2P52927 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hmga2P52927 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmga2P52927 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmga2P52927 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hmga2P52927 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Hmga2P52927 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hmga2P52927 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hmga2P52927 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga2P52927 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga2P52927 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga2P52927 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga2P52927 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hmga2P52927 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga2P52927 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hmga2P52927 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga2P52927 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga2P52927 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hmga2P52927 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Hmga2P52927 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hmga2P52927 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.02■□□□□ 0.8
Hmga2P52927 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga2P52927 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hmga2P52927 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hmga2P52927 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmga2P52927 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmga2P52927 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hmga2P52927 Gm24804-201ENSMUST00000174982 85 ntBASIC20■□□□□ 0.79
Hmga2P52927 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmga2P52927 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hmga2P52927 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga2P52927 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Hmga2P52927 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmga2P52927 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmga2P52927 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Hmga2P52927 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hmga2P52927 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmga2P52927 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmga2P52927 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmga2P52927 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.97■□□□□ 0.79
Hmga2P52927 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Hmga2P52927 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga2P52927 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmga2P52927 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Hmga2P52927 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmga2P52927 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmga2P52927 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmga2P52927 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga2P52927 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga2P52927 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.93■□□□□ 0.78
Hmga2P52927 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmga2P52927 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmga2P52927 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmga2P52927 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga2P52927 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hmga2P52927 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Hmga2P52927 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga2P52927 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.92■□□□□ 0.78
Hmga2P52927 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga2P52927 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga2P52927 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga2P52927 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga2P52927 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Hmga2P52927 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga2P52927 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hmga2P52927 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmga2P52927 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmga2P52927 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmga2P52927 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.88■□□□□ 0.77
Hmga2P52927 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga2P52927 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga2P52927 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga2P52927 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga2P52927 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga2P52927 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.87■□□□□ 0.77
Hmga2P52927 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga2P52927 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmga2P52927 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.86■□□□□ 0.77
Hmga2P52927 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.86■□□□□ 0.77
Hmga2P52927 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmga2P52927 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmga2P52927 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga2P52927 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hmga2P52927 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga2P52927 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms