Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 LEU4YNL104C 1860 nt9.45□□□□□ -0.9
MSH4P40965 SBP1YHL034C 885 nt9.45□□□□□ -0.9
MSH4P40965 GAS1YMR307W 1680 nt9.44□□□□□ -0.9
MSH4P40965 PTC6YCR079W 1329 nt9.43□□□□□ -0.9
MSH4P40965 MFT1YML062C 1179 nt9.43□□□□□ -0.9
MSH4P40965 PET18YCR020C 648 nt9.42□□□□□ -0.9
MSH4P40965 KAE1YKR038C 1161 nt9.42□□□□□ -0.9
MSH4P40965 YLR460CYLR460C 1131 nt9.42□□□□□ -0.9
MSH4P40965 GDH1YOR375C 1365 nt9.41□□□□□ -0.9
MSH4P40965 FET5YFL041W 1869 nt9.4□□□□□ -0.9
MSH4P40965 tL(UAA)B1tL(UAA)B1 84 nt9.4□□□□□ -0.9
MSH4P40965 tL(UAA)B2tL(UAA)B2 84 nt9.4□□□□□ -0.9
MSH4P40965 tL(UAA)DtL(UAA)D 84 nt9.4□□□□□ -0.9
MSH4P40965 SUP51tL(UAA)J 84 nt9.4□□□□□ -0.9
MSH4P40965 tL(UAA)KtL(UAA)K 84 nt9.4□□□□□ -0.9
MSH4P40965 tL(UAA)LtL(UAA)L 84 nt9.4□□□□□ -0.9
MSH4P40965 tL(UAA)NtL(UAA)N 84 nt9.4□□□□□ -0.9
MSH4P40965 MIM1YOL026C 342 nt9.39□□□□□ -0.91
MSH4P40965 YLR122CYLR122C 378 nt9.38□□□□□ -0.91
MSH4P40965 MFG1YDL233W 1377 nt9.37□□□□□ -0.91
MSH4P40965 NPP2YEL016C 1482 nt9.37□□□□□ -0.91
MSH4P40965 YPL041CYPL041C 624 nt9.37□□□□□ -0.91
MSH4P40965 GNP1YDR508C 1992 nt9.37□□□□□ -0.91
MSH4P40965 ADA2YDR448W 1305 nt9.36□□□□□ -0.91
MSH4P40965 THI3YDL080C 1830 nt9.36□□□□□ -0.91
MSH4P40965 UTR5YEL035C 501 nt9.36□□□□□ -0.91
MSH4P40965 RRT14YIL127C 621 nt9.36□□□□□ -0.91
MSH4P40965 YMR316C-BYMR316C-B 309 nt9.36□□□□□ -0.91
MSH4P40965 MET30YIL046W 1923 nt9.36□□□□□ -0.91
MSH4P40965 GGA2YHR108W 1758 nt9.35□□□□□ -0.91
MSH4P40965 EDC2YER035W 438 nt9.35□□□□□ -0.91
MSH4P40965 CAK1YFL029C 1107 nt9.35□□□□□ -0.91
MSH4P40965 tE(CUC)DtE(CUC)D 72 nt9.34□□□□□ -0.91
MSH4P40965 tE(CUC)ItE(CUC)I 72 nt9.34□□□□□ -0.91
MSH4P40965 BUR6YER159C 429 nt9.34□□□□□ -0.91
MSH4P40965 CHS7YHR142W 951 nt9.34□□□□□ -0.91
MSH4P40965 YPR084WYPR084W 1371 nt9.34□□□□□ -0.91
MSH4P40965 INH1YDL181W 258 nt9.33□□□□□ -0.92
MSH4P40965 TAD2YJL035C 753 nt9.33□□□□□ -0.92
MSH4P40965 GPM1YKL152C 744 nt9.33□□□□□ -0.92
MSH4P40965 THI6YPL214C 1623 nt9.33□□□□□ -0.92
MSH4P40965 tD(GUC)BtD(GUC)B 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)DtD(GUC)D 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)G1tD(GUC)G1 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)G2tD(GUC)G2 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)I1tD(GUC)I1 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)I2tD(GUC)I2 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)J1tD(GUC)J1 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)J2tD(GUC)J2 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)J3tD(GUC)J3 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)J4tD(GUC)J4 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)KtD(GUC)K 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)L1tD(GUC)L1 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)L2tD(GUC)L2 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)MtD(GUC)M 72 nt9.32□□□□□ -0.92
MSH4P40965 tD(GUC)OtD(GUC)O 72 nt9.32□□□□□ -0.92
MSH4P40965 YDR467CYDR467C 327 nt9.32□□□□□ -0.92
MSH4P40965 YNL190WYNL190W 615 nt9.32□□□□□ -0.92
MSH4P40965 ELP4YPL101W 1371 nt9.32□□□□□ -0.92
MSH4P40965 RTG2YGL252C 1767 nt9.32□□□□□ -0.92
MSH4P40965 OLA1YBR025C 1185 nt9.31□□□□□ -0.92
MSH4P40965 TOS1YBR162C 1368 nt9.31□□□□□ -0.92
MSH4P40965 OCH1YGL038C 1443 nt9.31□□□□□ -0.92
MSH4P40965 YJR149WYJR149W 1215 nt9.3□□□□□ -0.92
MSH4P40965 HBS1YKR084C 1836 nt9.29□□□□□ -0.92
MSH4P40965 YMR206WYMR206W 942 nt9.29□□□□□ -0.92
MSH4P40965 HOG1YLR113W 1308 nt9.29□□□□□ -0.92
MSH4P40965 SDH8YBR269C 417 nt9.28□□□□□ -0.92
MSH4P40965 YLR173WYLR173W 1827 nt9.27□□□□□ -0.93
MSH4P40965 YER156CYER156C 1017 nt9.27□□□□□ -0.93
MSH4P40965 RPS6AYPL090C 711 nt9.27□□□□□ -0.93
MSH4P40965 RPS6BYBR181C 711 nt9.27□□□□□ -0.93
MSH4P40965 DUR3YHL016C 2208 nt9.26□□□□□ -0.93
MSH4P40965 MET22YOL064C 1074 nt9.26□□□□□ -0.93
MSH4P40965 PRE5YMR314W 705 nt9.25□□□□□ -0.93
MSH4P40965 YPT31YER031C 672 nt9.24□□□□□ -0.93
MSH4P40965 YBL095WYBL095W 813 nt9.24□□□□□ -0.93
MSH4P40965 LAS17YOR181W 1902 nt9.24□□□□□ -0.93
MSH4P40965 DUS3YLR401C 2007 nt9.24□□□□□ -0.93
MSH4P40965 BAP3YDR046C 1815 nt9.24□□□□□ -0.93
MSH4P40965 TRP2YER090W 1524 nt9.23□□□□□ -0.93
MSH4P40965 LCP5YER127W 1074 nt9.23□□□□□ -0.93
MSH4P40965 TDH1YJL052W 999 nt9.23□□□□□ -0.93
MSH4P40965 ADE1YAR015W 921 nt9.23□□□□□ -0.93
MSH4P40965 BXI1YNL305C 894 nt9.23□□□□□ -0.93
MSH4P40965 AAC3YBR085W 924 nt9.23□□□□□ -0.93
MSH4P40965 PET494YNR045W 1470 nt9.22□□□□□ -0.93
MSH4P40965 YJL043WYJL043W 774 nt9.22□□□□□ -0.93
MSH4P40965 HXT11YOL156W 1704 nt9.21□□□□□ -0.94
MSH4P40965 URH1YDR400W 1023 nt9.2□□□□□ -0.94
MSH4P40965 TOM20YGR082W 552 nt9.2□□□□□ -0.94
MSH4P40965 TMS1YDR105C 1422 nt9.2□□□□□ -0.94
MSH4P40965 GCD11YER025W 1584 nt9.2□□□□□ -0.94
MSH4P40965 PDC6YGR087C 1692 nt9.2□□□□□ -0.94
MSH4P40965 YMC2YBR104W 990 nt9.19□□□□□ -0.94
MSH4P40965 FUS3YBL016W 1062 nt9.18□□□□□ -0.94
MSH4P40965 RNA170RNA170 169 nt9.18□□□□□ -0.94
MSH4P40965 YIR035CYIR035C 765 nt9.17□□□□□ -0.94
MSH4P40965 ECM10YEL030W 1935 nt9.16□□□□□ -0.94
MSH4P40965 BMT5YIL096C 1011 nt9.16□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms